Exo- versus endoroot bacteria

184 A.V. Sturz, J. Nowak Applied Soil Ecology 15 2000 183–190 In recent times the term ‘endophyte’ has been ap- plied almost exclusively to fungi Carroll, 1988; Clay, 1988; including the mycorrhizal fungi O’Dell and Trappe, 1992. However, a more comprehensive defi- nition is one which includes ‘fungi or bacteria, which for all or part of their life cycle, invade the tissues of living plants and cause unapparent and asymptomatic infections entirely within plant tissues, but cause no symptoms of disease’ Wilson, 1995. The recovery of bacterial populations from the en- dodermis and root cortex of plants has been used to promote the idea that many bacteria in the rhi- zosphere are able to penetrate and colonize root tis- sues Quadt-Hallman et al., 1997a,b. The inclusion of endophytic bacteria into the bacterial rhizosphere community was proposed by Darbyshire and Greaves 1973, and supported by Old and Nicolson 1978. In this model the root cortex becomes part of the soil–root microbial environment, resulting in a con- tinuous apoplastic pathway from the root epidermis to the shoot, sufficient for movement of microorganisms into the xylem Petersen et al., 1981. Thus, a con- tinuum of root-associated microorganisms exist which are able to inhabit the rhizosphere, the root cortex and other plant organs Kloepper et al., 1992.

2. Exo- versus endoroot bacteria

Conventional classifications, based on function, have grouped rhizobacteria — both those that exist outside exoroot and within root tissues endoroot — into two broad categories based on the relative benefit they confer to the plants with which they are associated. Thus, the deleterious rhizobacteria DRB Fredrickson and Elliott, 1985; Schippers et al., 1987, are so-called because they are considered to adversely influence root health and plant well-being, while the plant growth promoting bacteria PGPR see reviews by Glick, 1995; Arshad and Frankenberger, 1998 are considered to form part of a protective flora which provide benefit to the plant in the form of enhanced root function, disease suppression and accelerated plant development. The equivocal nature of such classifications has been pointed out by Nehl et al. 1996, as exoroot bacterial influence has been shown to fluctuate according to environmental conditions Bakker et al., 1987; Chanway and Holl, 1994, host genotype Cherrington and Elliot, 1987; Åström and Gerhardson, 1988 and collateral mycorrhizal sta- tus see reviews by Azcón-Aguilar and Barea, 1992; Linderman, 1994. Interestingly, root health and cell longevity can be viewed as exclusive of rhizobacterial influence. Henry and Deacon 1981 proposed that, for most plants, rhi- zodermal and cortical cell death is an autolytic process which occurs in the absence of microorganism activity. Thus, the conventional view of root internal coloniza- tion by exoroot bacteria is one which occurs following rhizodermal autolysis Darbyshire and Greaves, 1973; Foster and Rovira, 1978; Old and Nicolson, 1978. This led Foster and Bowen 1982 to consider that the population densities of organisms in the rhizoplane are the result of cell death and not its cause. In all the above examples the emphasis has been on the influence of exoroot bacteria. However, plants can be colonized by a beneficial microbial endoflora prior to root autolysis Frommel et al., 1991; Nowak, 1998. The specificity between endoroot bacteria and their hosts Conn et al., 1997; Bensalim et al., 1998 is similar to that found in exoroot associations Neal et al., 1970; Bowen and Rovira, 1976; Miller et al., 1989; Bolton et al., 1993; Merharg and Killham, 1995. van Peer et al. 1990 reported that endophytic and exoroot bacteria from the same genera formed discrete sub-populations each suited to colonizing their respective niches, and such adaptations do not appear to be easily reversible. McInroy and Kloepper 1995 observed that seed endophytes tend to develop into seedling endophytes. Bell et al. 1995, however, considered endophytic and rhizosphere populations of bacteria to be distinct, based on differences in their hydrolytic enzyme complement. The community effect of endoroot bacteria on ex- oroot populations is seldom examined. However, the endoplant bacterial community can modify root mor- phology Nowak, 1998 and ultrastructure Benhamou et al., 1996 and may influence the way in which exoroot bacterial communities function and affect plant growth Sturz, 1995; Sturz and Christie, 1995; Quadt-Hallman et al., 1997a. To paraphrase Andrews 1990, if we are to manipulate the assembled species and construct or enhance complimentary communi- ties of endo- and exorhizobacteria that confer positive benefits for crop production, a fuller appreciation of community structure and function, and the major A.V. Sturz, J. Nowak Applied Soil Ecology 15 2000 183–190 185 organizing forces that govern such communities need to be determined.

3. A strategy for creating stable microbial communities