inetika Pertumbuhan Fermentasi | Blog Mas'ud Effendi
Kinetika Pertumbuhan
Agroindustri Produk Fermentasi
Kompetensi yang Diharapkan
Menguasai kinetika pertumbuhan
mikroorganisme sehingga tepat penerapannya
untuk operasi industri fermentasi secara batch,
kontinyu dan fed-batch.
Menguasai kinetika pertumbuhan
mikroorganisme sehingga tepat penerapannya
untuk operasi industri fermentasi produk
metabolit primer, metabolit sekunder, biomassa
sel, dan produk biotransformasi.
1
Microbial Growth
Microbial Cell Growth
Mode of Growth
Selective assimilation of nutrients and
convert into and also include Chemical
rearrangement of protoplasmic material
characteristic of the particular organism
Production of an increased amount of
nuclear substance and cell division
2
Growth Phase
Growth Phase
Induction Phase (Lag Phase)
Transient Phase (Acceleration Phase)
Exponential Phase
Stationary Phase (Declining Phase)
Death Phase
3
Question Sheet
Why microbial growth have an lag phase?
Why death phase could be occurred in microbial
growth?
What is essential nutrient for growth of organism
especially prokaryotes?
What is important factor for cell division?
Growth Approximation
4
Growth Constants
Exponential – Stationary Growth Phase
G (Xm Xi )
Total Biomass Production(G)
Incident growth rate, Incident mean division rate ()
ln XX2 1 dX
1
t t X dt
2 1
Specific growth rate, Beginning mean division rate ()
lim
t 0
1 dX
X dt
Doubling time of population (D); exponential growth phase
D
ln 2
Classical Growth Kinetics
Empirical Approximation
Monod Growth Kinetic
Tessier Growth Kinetic
Moser Growth Kinetic
Contois Growth Kinetic
μ μ
s
Κs s
1 e s / K
1 Ks s
s
1
s
B X s
5
Empirical Growth Kinetics
Medium constituent Inhibition
Aiba Growth Kinetic
s
Ks s
i
Andrews Growth Kinetic
K
2
s
s Kp
K s s K p p
Growth Kinetics
Multiple essential nutrient
Bailey Growth Kinetic
s1
s2
s3
...
K s1 s1 K s 2 s2 K s 3 s3
6
Home Work
Which kinetic approximation do you choose in case of
microbial growth of Hepatotoxin produced Oscilatoria
Agardhii NIVA CYA 97 in low temperature?
Which empirical equation that you choose of inoculation
of microorganism in case of multiple content limitation of
nutrients, such as Mg2+, phosphate, Nitrate and organic
compound?
Which kinetic approximation do you choose of
cultivation photosynthetic microorganism that did not
grew up in pH above 7.8?
Simple Bio-Production Kinetic
Cellular growth rate
Monod approximation
s
μ μ
Κs s
Yield factor
YX / s
X dXdt
s dsdt
dX
μ X
dt
YP / X
Substrate Utilization
Product Formation
(Beginning of Stationary Phase)
dX
s X
μ
dt
Ks s
P dPdt
X dXdt
ds
μ
s X
dt Y X / s K s s
dP
s X
YP / X
dt
Ks s
7
Environmental
Alteration Studies
Microbial Growth Kinetic
Enviromental Condition
Direct Effects
Light Illumination (Energy Source)
Temperature
Essential nutrients content
Indirect Effects
Gas inlet volumetric rate
Gas inlet content
Liquid circulation rate
Non essential nutrients content
8
Light Illumination Effect
Oscillatoria agardhi Gomont
(Post AF, R de Witt, LC Mur, J. Plank. Res., 7 (1985) 487-495)
Temperature effect
Modified Arhenius Model
Ae
Ea / RT
1 e
T
T
Sd
R
H d
R
9
Temperature Effect
Classification of Microorganism
Question Sheet
What is happen if microorganism is at 90oC? Why?
In case of decreasing of temperature about 20oC from
optimum temperature, what is happen in case of microbial
growth rate?
In case of ethanol production that was S. sake have
ethanol tolerance around 10%, what do you do to make an
whisky industry?
Why a shade microbe does not grew well in high light
illumination and commonly have not high temperature
resistance?
10
Temperature Effect
Cellular Consideration
Psychrophile
Obligate
Facultative
Anabena cylindrica Lemmerman
Oscillatoria Agardhi Gomont
Nostoc commune Antartica
Mesophile
Protococcus Agardh SS 100-3
Oscillatoria redekei Van Goor
Oscillatoria sp. SS 100-5
Synechococcus leopoliensis
Anabaena variabilis IAM M3
Microcystis Aeruginosa IAM M228
Thermophile
Mastigocladus laminosus HTF
Synechococcus lividus OH75S
Synechcocus elongatus It 7S
Home Work
Why optimum specific growth rate values of
psychrophile factually, lower than thermophile?
Why GC content of microbial DNA is important
for classification of organism in terms of growth
rate dependence on temperature?
What is DBI?
11
Microbial Kinetic Studies
Non Elementer Reaction
ds
k sn
dt
N = integer
Common reaction rate
N = non integer
Non Elementer Example :
Elementer
Non Elementer
CH 3CHO CH 4 CO
H 2 Br2 2HBr
3
d CH 3CHO
k CH 3CHO 2
dt
d Br2 k1 'Br2 2 H 2
dt
[ HBr ] k 2 'Br2
3
12
Reaction Mechanism
2 NO 2 H 2 N 2 2 H 2O
2 NO N 2O2
k1
N 2 O 2 H 2 N 2 H 2 O2
k1
k2
H 2 H 2 O2 2 H 2 O
k3
d H 2O2
0
dt
d N 2O2
0
dt
N 2O2 / H 2O2
k 2 N 2 O 2 H 2 k 3 H 2 O 2 H 2 0
k1 NO k1 N 2O2 k2 N 2O2 H2 0
2
H 2 O 2 k 2 N 2 O 2
k3
2
N 2O2 k1 NO
k 1 k 2 1 H 2
k1
d N 2
NO 2 H k1 k2 NO 2 H 2
k 2 N 2O2 H 2 k 2
2
dt
k 1 k 2
1 H 2
k 1 k 2 1 H 2
Question Sheet
What is mechanism path?
What definition of intermediate species?
What was become determining factor of reaction
rate?
13
Microbial Growth
Enzymatic Reaction/Kinetic consideration
E S ES
Reaction mechanism
Kinetic equation
s
Km s
k1
Substrate Actvation and Inhibition
k2
k1
E S ES
ES S ES 2
E S ES
ES P E
Reaction mechanism
k1
ES P E
Michaelis-Menten Kinetics
k2
s
K m s s 2 / Ki
Product Activation and Inhibition
Kinetic equation
Reaction mechanism
k 1
k2
k1
Kinetic equation
k 1
k 2
sKp
K s s K p p
ES P E
k3
ES P ESP
k3
k 3
Michaelis-Menten Kinetics
E S ES
Reaction mechanism
k1
k 1
E0 E ES
Kinetic derivation
ES P E
k2
ES 0 0
d
dt
ES 0
ES k1 S E k 1 k 2 ES
d
dt
P k 2 ES
d
dt
ES
k1
k1
S E
S E0 ES
k 1 k 2
k 1 k 2
ES Ek0 S k
S 1 2
k1
k2 E0 S
k k
S 1 2
k1
dtd P max S
S Km
14
Agroindustri Produk Fermentasi
Kompetensi yang Diharapkan
Menguasai kinetika pertumbuhan
mikroorganisme sehingga tepat penerapannya
untuk operasi industri fermentasi secara batch,
kontinyu dan fed-batch.
Menguasai kinetika pertumbuhan
mikroorganisme sehingga tepat penerapannya
untuk operasi industri fermentasi produk
metabolit primer, metabolit sekunder, biomassa
sel, dan produk biotransformasi.
1
Microbial Growth
Microbial Cell Growth
Mode of Growth
Selective assimilation of nutrients and
convert into and also include Chemical
rearrangement of protoplasmic material
characteristic of the particular organism
Production of an increased amount of
nuclear substance and cell division
2
Growth Phase
Growth Phase
Induction Phase (Lag Phase)
Transient Phase (Acceleration Phase)
Exponential Phase
Stationary Phase (Declining Phase)
Death Phase
3
Question Sheet
Why microbial growth have an lag phase?
Why death phase could be occurred in microbial
growth?
What is essential nutrient for growth of organism
especially prokaryotes?
What is important factor for cell division?
Growth Approximation
4
Growth Constants
Exponential – Stationary Growth Phase
G (Xm Xi )
Total Biomass Production(G)
Incident growth rate, Incident mean division rate ()
ln XX2 1 dX
1
t t X dt
2 1
Specific growth rate, Beginning mean division rate ()
lim
t 0
1 dX
X dt
Doubling time of population (D); exponential growth phase
D
ln 2
Classical Growth Kinetics
Empirical Approximation
Monod Growth Kinetic
Tessier Growth Kinetic
Moser Growth Kinetic
Contois Growth Kinetic
μ μ
s
Κs s
1 e s / K
1 Ks s
s
1
s
B X s
5
Empirical Growth Kinetics
Medium constituent Inhibition
Aiba Growth Kinetic
s
Ks s
i
Andrews Growth Kinetic
K
2
s
s Kp
K s s K p p
Growth Kinetics
Multiple essential nutrient
Bailey Growth Kinetic
s1
s2
s3
...
K s1 s1 K s 2 s2 K s 3 s3
6
Home Work
Which kinetic approximation do you choose in case of
microbial growth of Hepatotoxin produced Oscilatoria
Agardhii NIVA CYA 97 in low temperature?
Which empirical equation that you choose of inoculation
of microorganism in case of multiple content limitation of
nutrients, such as Mg2+, phosphate, Nitrate and organic
compound?
Which kinetic approximation do you choose of
cultivation photosynthetic microorganism that did not
grew up in pH above 7.8?
Simple Bio-Production Kinetic
Cellular growth rate
Monod approximation
s
μ μ
Κs s
Yield factor
YX / s
X dXdt
s dsdt
dX
μ X
dt
YP / X
Substrate Utilization
Product Formation
(Beginning of Stationary Phase)
dX
s X
μ
dt
Ks s
P dPdt
X dXdt
ds
μ
s X
dt Y X / s K s s
dP
s X
YP / X
dt
Ks s
7
Environmental
Alteration Studies
Microbial Growth Kinetic
Enviromental Condition
Direct Effects
Light Illumination (Energy Source)
Temperature
Essential nutrients content
Indirect Effects
Gas inlet volumetric rate
Gas inlet content
Liquid circulation rate
Non essential nutrients content
8
Light Illumination Effect
Oscillatoria agardhi Gomont
(Post AF, R de Witt, LC Mur, J. Plank. Res., 7 (1985) 487-495)
Temperature effect
Modified Arhenius Model
Ae
Ea / RT
1 e
T
T
Sd
R
H d
R
9
Temperature Effect
Classification of Microorganism
Question Sheet
What is happen if microorganism is at 90oC? Why?
In case of decreasing of temperature about 20oC from
optimum temperature, what is happen in case of microbial
growth rate?
In case of ethanol production that was S. sake have
ethanol tolerance around 10%, what do you do to make an
whisky industry?
Why a shade microbe does not grew well in high light
illumination and commonly have not high temperature
resistance?
10
Temperature Effect
Cellular Consideration
Psychrophile
Obligate
Facultative
Anabena cylindrica Lemmerman
Oscillatoria Agardhi Gomont
Nostoc commune Antartica
Mesophile
Protococcus Agardh SS 100-3
Oscillatoria redekei Van Goor
Oscillatoria sp. SS 100-5
Synechococcus leopoliensis
Anabaena variabilis IAM M3
Microcystis Aeruginosa IAM M228
Thermophile
Mastigocladus laminosus HTF
Synechococcus lividus OH75S
Synechcocus elongatus It 7S
Home Work
Why optimum specific growth rate values of
psychrophile factually, lower than thermophile?
Why GC content of microbial DNA is important
for classification of organism in terms of growth
rate dependence on temperature?
What is DBI?
11
Microbial Kinetic Studies
Non Elementer Reaction
ds
k sn
dt
N = integer
Common reaction rate
N = non integer
Non Elementer Example :
Elementer
Non Elementer
CH 3CHO CH 4 CO
H 2 Br2 2HBr
3
d CH 3CHO
k CH 3CHO 2
dt
d Br2 k1 'Br2 2 H 2
dt
[ HBr ] k 2 'Br2
3
12
Reaction Mechanism
2 NO 2 H 2 N 2 2 H 2O
2 NO N 2O2
k1
N 2 O 2 H 2 N 2 H 2 O2
k1
k2
H 2 H 2 O2 2 H 2 O
k3
d H 2O2
0
dt
d N 2O2
0
dt
N 2O2 / H 2O2
k 2 N 2 O 2 H 2 k 3 H 2 O 2 H 2 0
k1 NO k1 N 2O2 k2 N 2O2 H2 0
2
H 2 O 2 k 2 N 2 O 2
k3
2
N 2O2 k1 NO
k 1 k 2 1 H 2
k1
d N 2
NO 2 H k1 k2 NO 2 H 2
k 2 N 2O2 H 2 k 2
2
dt
k 1 k 2
1 H 2
k 1 k 2 1 H 2
Question Sheet
What is mechanism path?
What definition of intermediate species?
What was become determining factor of reaction
rate?
13
Microbial Growth
Enzymatic Reaction/Kinetic consideration
E S ES
Reaction mechanism
Kinetic equation
s
Km s
k1
Substrate Actvation and Inhibition
k2
k1
E S ES
ES S ES 2
E S ES
ES P E
Reaction mechanism
k1
ES P E
Michaelis-Menten Kinetics
k2
s
K m s s 2 / Ki
Product Activation and Inhibition
Kinetic equation
Reaction mechanism
k 1
k2
k1
Kinetic equation
k 1
k 2
sKp
K s s K p p
ES P E
k3
ES P ESP
k3
k 3
Michaelis-Menten Kinetics
E S ES
Reaction mechanism
k1
k 1
E0 E ES
Kinetic derivation
ES P E
k2
ES 0 0
d
dt
ES 0
ES k1 S E k 1 k 2 ES
d
dt
P k 2 ES
d
dt
ES
k1
k1
S E
S E0 ES
k 1 k 2
k 1 k 2
ES Ek0 S k
S 1 2
k1
k2 E0 S
k k
S 1 2
k1
dtd P max S
S Km
14