CALLUS INDUCTION AND VIABILITY OF MANGOSTEEN (GARCINIA MANGOSTANA L.) FROM IN VITRO BUD.
ICoBio 2015
International Conference on Bosciences
Program Book
Department of Biology
Table of Contents
Welcome Speech of Chairman of Organizing Committee ............................................................. 1
Opening Remark of Dean of the Faculty of Mathematics and Natural Sciences ................ 3
Opening Remark of Rector of Bogar Agricultural University ..................................................... 4
Committee ........................................................................................................................................................... 6
Conference Program ....................................................................................................................................... 7
IPB ICC Conference Layout.. ...................................................................................................................... lO
Speaker Profiles .............................................................................................................................................. ll
Abstracts of Keynote and Invited Speakers ...................................................................................... 25
Oral and Poster Presentation Schedule ............................................................................................... 37
Abstracts of Oral Presentation ................................................................................................................ 63
Abstracts of Poster Presentation ......................................................................................................... 193
Tour destination: Taman Mini Indonesia Indah and Bogar Botanical Garden ............. 237
Bogar Interesting Places ......................................................................................................................... 238
Common Indonesian Language ............................................................................................................ 239
Index ................................................................................................................................................................. 240
International Conference on Biosciences (ICoBio) 2015- Bogor, 5-7 August 2015
ICoBio.eventipb.ac. id
ii
Welcome Speech of Chair
Our knowledge in
understanding of
application or explo
industrial, medical,
advances in applie
implications, such a
sources, the develo1
of understanding
disorders. Nevertheless, the preseno
molecular biology, bioinformatics, bic
between biological and social bioscienc
better world. Advances in biology wil
individuals and appreciate human biodi
International Conference on Bioscie
"Appreciating Unity in Diversity". Thil
current trends in research and teachin
approaches that are important for unt
Moreover, to encourage the formation
stakeholders to accelerate our efforts I
their applications.
This page intentionally left blank.
The ICoBio 2015 is attended by particiJ
Malaysia, India, Pakistan, Germany, Th<
register are 220 participants. Howevt
accepted as a presenter, so there is s'
(attendant). Due to the wide scope of bit
four main groups focusing on Biodi·
physiological, developmental, and beha
biotechnology, and omic technology (!
biology (group 4).
In addition, a series of activities were <
namely the activity of "One day lecture i
August-Universitat Gi.ittingen, German)
Bogar entitled "Symposium on Bogor
Institute of Science and Technology (J<
Through those activity the participan
regarding bioinformatic and the current
International Conference on Biosciences (ICoBio) 2015 · Bogor, 5-7 August 2015
/CoBio.eventipb.ac.id
International Conference on Biosciences (ICoBio) 20:
1
Welcome Speech of Chairman of Organizing Committee
Our knowledge in biology has allowed us to achieve a better
understanding of many biological phenomena and their
application or exploitation in agriculture, food safety and security,
industrial, medical, and environmental conservation. However,
advances in applied biology ca'l also produce some negative
implications, such as reducing biodiversity, the imbalance in food
sources, the development of new agents of infection, and the lack
of understanding of non-infectious diseases or metabolic
disorders. Nevertheless, the presence of the interdisciplinary sciences such as
molecular biology, bioinformatics, bio-nanotechnology, and even the relationship
between biological and social biosciences, will be a very useful to help us in creating a
better world. Advances in biology will be able to expand our views to be unique
individuals and appreciate human biodiversity to live in peace and harmony.
left blank.
International Conference on Biosciences (ICoBio) 2015 taking the theme of
"Appreciating Unity in Diversity". This conference is intended to gain insight into
current trends in research and teaching related to biology, such as interdisciplinary
approaches that are important for understanding the biology and its applications.
Moreover, to encourage the formation of networks between biologists and relevant
stakeholders to accelerate our efforts to understand the biological phenomena and
their applications.
The ICoBio 2015 is attended by participants from several countries including japan,
Malaysia, India, Pakistan, Germany, Thailand, and Indonesia. Total participants who
register are 220 participants. However not all participant who register can be
accepted as a presenter, so there is some participant suggested as non-presenter
(attendant). Due to the wide scope of bioscience, the ICoBio 2015 topic is divided into
four main groups focusing on Biodiversity, ecology, and evolution (group 1);
physiological, developmental, and behavioral sciences (group 2); Molecular biology,
biotechnology, and omic technology (group 3); and Applied and interdisciplinary
biology (group 4).
In addition, a series of activities were also conducted before the conference begins,
namely the activity of "One day lecture in Bioinformatics by Prof Rolf Daniel - GeorgAugust-Universitat Gi.ittingen, Germany" and mini symposium NAIST japan - IPB
Bogor entitled "Symposium on Bogor Agricultural University (Indonesia) - Nara
Institute of Science and Technology (Japan) Graduate Student Exchange Program".
Through those activity the participants are expected to gain extensive insight
regarding bioinformatic and the current techniques in modern biotechnology.
, 5-7 August ZOlS
International Conference on Biosciences (ICoBio) ZOlS- Bogor, 5-7 August Z015
ICoBio.eventipb.ac.id
2
The ICoBia 2015 is the first international conference organized by the Department of
Biology, Faculty of Mathematics and Natural Sciences, Bogar Agricultural University,
Indonesia and is expected to serve as an initial step to be held continuously every two
years (bianually). This activity is also the first step in the framework of collaboration
between the Faculty of Mathematics and Natural Sciences (especially Department of
Biology) Bogar Agricultural University, Indonesia with the Faculty of Science,
Kasetsart University, Thailand. Through such activities will be able to foster a love of
bioscience and the exchange of information on bioscience and the development of
networking between researchers. I am sure you will be able to find on the conference
program is really fun, encourage intellectual and also provide important insights on
the way forward how to appreciate bioscience.
Special welcome is intended to young scientists and students on whom the future of
biosciences depends. You have a great opportunity at this meeting to get to know the
main leaders in field of bioscience and to network with your colleagues. The need for
international collaboration is essential to take advantage of bioscience and related
sciences optimally.
Finally, I hope you will find your experience in Bogar, Indonesia to be unique,
satisfying, and enjoyable.
With warmest welcome,
Opening Remark of Dean o:
Natur
Bismillahirrahmanirrahim
In the name of Allah the Most Gracious ·
Ladies and gentlemen
First of all I would like to express my
keynote and invited speakers for carr.
Conference on Biosciences (!CoBia ~
Faculty of Mathematics and Natural :
forum is very important to all of us, res
countries, to share and discuss new vie
Your contribution in this seminar will
and research in biosciences, it will alsc
our life and our future. Biosciences con
the Conference "Appreciating Unity in
utilize our diverse knowledge to explo1
and sustainability of humanity.
On this occasion, I especially would li~
Kasetsart University, Thailand for
cooperation with the Faculty of Math en
University, particularly in the area
cooperation will mutually benefit and s
Prof. Aris Tri Wahyudi
Chairman
Organizing Committee
Last but not least, I also would like to I
of Biology, FMIPA-IPB, all of whom
international seminar. I hope this sem
advantages to all participants.
Dr. Jr. Sri Nurdiati, M.Sc
International Conference on Biosciences (ICoBio) 2015- Bogar,· 5-7 August 2015
ICoBio.event. ipb.ac.id
International Conference on Biosciences (ICoBio) 2
2
3
conference organized by the Department of
Sciences, Bogor Agricultural University,
step to be held continuously every two
first step in the framework of collaboration
Natural Sciences (especially Department of
Indonesia with the Faculty of Science,
activities will be able to foster a love of
on bioscience and the development of
you will be able to find on the conference
and also provide important insights on
and students on whom the future of
at this meeting to get to know the
network with your colleagues. The need for
take advantage of bioscience and related
Bogor, Indonesia to be unique,
Opening Remark of Dean of the Faculty of Mathematics and
Natural Sciences
Bismil/ahirrahmanirrahim
In the name of Allah the Most Gracious the Most Merciful
Ladies and gentlemen
First of all I would like to express my sincere gratitude to all participants especially
keynote and invited speakers for coming to this international event, International
Conference on Biosciences (ICoBio 2015) organized by Department of Biology,
Faculty of Mathematics and Natural Sciences, Bogor Agricultural University. This
forum is very important to all of us, researchers from Indonesia as well as from other
countries, to share and discuss new views and information in the field of biosciences.
Your contribution in this seminar will not only support and strengthen our teaching
and research in biosciences, it will also demonstrate how important bioscience is for
our life and our future. Biosciences comprise many disciplines, therefore the theme of
the Conference "Appreciating Unity in Diversity" should be able to encourage us to
utilize our diverse knowledge to explore nature in a spirit of harmony for the benefit
and sustainability of humanity.
On this occasion, I especially would like to thank the Dean of the Faculty of Science,
Kasetsart University, Thailand for her presence which served to strengthen
cooperation with the Faculty of Mathematics and Natural Sciences, Bogor Agricultural
University, particularly in the area of Biological Sciences. We expect that this
cooperation will mutually benefit and strengthen researches in both universities.
Last but not least, I also would like to thank to the entire team from the Department
of Biology, FMIPA-IPB, all of whom worked hard to prepare and organize this
international seminar. I hope this seminar will be successful and will provide many
advantages to all participants.
Dr. Ir. Sri Nurdiati, M.Sc
ICoBio.eventipb.ac.id
International Conference on Biosciences (ICoBio) 2015 • Bogor, 5·7 August 2015
ICoBio.eventipb.ac.id
4
Opening Remark of Rector of Bogor Agricultural University
Finally I express my sincere gratitude t<
of !CoBia 2015.
Ladies and Gentlemen,
Thank you for your participation in th1
be enjoyable.
Welcome to Bogar, Indonesia
Welcome to Bogar Agricultural University, Indonesia
Rector of Bogar Agricultural University
It is an honor for us upon your arrival this morning to attend the "International
Conference on Biosciences (!CoBia) 2015" held in Bogar Agricultural University
(Institut Pertanian Bogar, IPB), Indonesia. This conference is an important part in
relation to the basics and applied sciences related to bioscience. In this case, the basic
science is an important part in the development of the applied sciences, especially in
IPB, is also stated in the vision of IPB which will be the front-runner in strengthening
the nation's dignity through excellent higher education on a global level in
agriculture, marine and tropical biosciences. In addition, lPB is also a university that
is heading toward an international research based university, so that this conference
will be an important moment to achieve the IPB vision.
Prof Herry Suhardiyanto
Through this opportunity, we would like to express our gratitude to Director General
of Learning and Student Affairs, Ministry of Research, Technology and Higher
Education, Prof. In tan Ahmad; our collaborators speakers (Prof Hiroshi Takagi - Nara
Institute of Science and Technology, japan; Prof Rolf Daniel - Georg-AugustUniversitat Giittingen, Germany; Prof Supa Hannongbua - Kasetsart University,
Thailand; and Dr. Mashuri Waite- University of Hawaii, USA) and other speakers (Dr.
Reymond Tjandrawinata - PT Dexa Medica jakarta, Indonesia; Prof Daniel Murdiyarso
- Bogar Agricultural University, Indonesia; Dr. Achmad Dinoto - Indonesian Institute
of Sciences, Indonesia; Dr. Miftahudin - Bogar Agricultural University, Indonesia; and
Dr. Seiji Mori- Ibaraki University, japan) for their participation in ICoBio 2015. Also, I
would like to give sincere gratitude to the Organizing Committee and Steering
Committee for the efforts they provide for this international conference.
The main theme of this conference is the "International Conference on Biosciences:
Unity in Diversity". This theme is in accordance with the present condition, where we
can meet each other and exchange information on the development of biosciences in
Indonesia in particular, and also in the world. Through this conference, we also expect
an establishment of network or cooperation between researchers or participants.
ICoBio 2015 is organized by Department of Biology, Faculty of Mathematics and
Natural Sciences, Bogar Agricultural University, as a forum of knowledge sharing in
very wide and global research area in field of bioscience and others related sciences.
This suggests that IPB is active in the development of science and technology, not
only in Indonesia but also in the world.
International Conference on Biosciences (ICoBio) 20
International Conference on Biosciences (ICoBio) 2015- Bogar, 5-7 Augu st 2015
ICoBio.eventipb.ac.id
5
Bogor Agricultural University
Finally I express my sincere gratitude to all participants who attended the conference
of !CoBia 2015.
Thank you for your participation in the !CoBia 2015 and I hope this conference will
be enjoyable.
Indonesia
morning to attend the "International
" held in Bogar Agricultural University
This conference is an important part in
to bioscience. In this case, the basic
of the applied sciences, especially in
will be the front-runner in strengthening
higher education on a global level in
In addition, IPB is also a university that
based university, so that this conference
IPB vision.
Rector of Bogar Agricultural University - Indonesia
Prof Herry Suhardiyanto
express our gratitude to Director General
of Research, Technology and Higher
speakers (Prof Hiroshi Takagi - Nara
Prof Rolf Daniel - Georg-AugustHannongbua - Kasetsart University,
of Hawaii, USA) and other speakers (Dr.
Jakarta, Indonesia; Prof Daniel Murdiyarso
Dr. Achmad Dinoto - Indonesian Institute
Agricultural University, Indonesia; and
r their participation in !CoBia 2015. Also, I
the Organizing Committee and Steering
international conference.
"International Conference on Biosciences:
with the present condition, where we
on the development of biosciences in
. Through this conference, we also expect
n between researchers or participants.
of Biology, Faculty of Mathematics and
, as a forum of knowledge sharing in
of bioscience and others related sciences.
of science and technology, not
Bogor, 5-7 August 2015
International Conference on Biosciences (ICoBio) 2015 • Bogor, 5·7 August 20 15
/CoBio.eventipb.ac.id
6
Committee
Confere1
Steering Committe
WEDNESDAY, AUGUST 5, 2015
Time
Activity
allocation
ProfDr Antonius Suwanto (Chairman)
ProfDr Hiroshi Takagi
Prof Dr Alex Hartana
Prof Dr uharsono
Dr Dedi Duryadi Solihin
Prof Dr Aris Tri Wahyudi
08.00-08.45
Welcome speech:
Chair of Organizing Co
Opening Speech:
09.00-09.10
Rector of IPB
Plenary Session
08.45-09.00
Organizing Committee
ProfDr Aris Tri Wahyudi (Chairman)
Prof Dr YM Diah
Ratnadewi (Secretary)
Dr Rika Raffiudin (Secretary)
Dr Triadiati
Dr Berry }uliandi
Mafrikhul Muttaqin, MSi
Dr Miftahudin
Dr Tatik Chikmawati
Dr Dyah Perwitasari
Prof Dr Anja Meryandini
Registration
Dr Utut Widyastuti
Dr Sulistijorini
Dr Sri Listyowati
Dr Nisa Rachmania
Dr Kanthi Arum
Puji Rianti, MSi
Dr Achmad Farajallah
Dr Tri Atmowidi
DrYohana CS
Dr Aris Tjahjoleksono
Keynote Speaker:
09.10-09.30
Prof. Dr. In tan Ahmad:
General of Learning ar
Affairs, Ministry of Rel
Technology and Highe
09.30-10.00
Prof. Dr. Supa Hannollj
10.00-10.15
Morning tea break
Invited Speakers:
10.15-10.45
The Committee of International Conference on Biosciences (ICoBio) 2015
Department of Biology, Faculty of Mathematics and Natural Sciences
Darmaga Campuss, Bogor Agricultural University (IPB)
}1. Agathis-Kamp':ls IPB Darmaga Bogor 16680 Indonesia
Website: http:/ jicobio.event.ipb.ac.id/
International Conference on Biosciences (ICoBio) 2015- Bogar, 5-7 August 2015
ICoBio.eventipb.ac.id
Prof. Dr. Rolf Daniel
10.45-11.15
Dr. Achmad Dinoto
11.15-11.45
Prof. Dr. Daniel Murdi)
11.45-12.00
Discussion
12.00-12.30
Poster Introduction Pr
(P01-P22)
12.30-13.30
Lunch
13.30-14.00
Poster Session
14.00-16.00
Parallel Oral Session
16.00-16.15
Afternoon tea break
16.15-17.15
Parallel Oral Session
18.45-21.00
Welcome Dinner
International Conference on Biosciences (ICoBio) 20]
7
6
Conference Program
IWEDNESDAY, AUGUST 5, 2015
Time
allocation
Activity
Room
IPB International
08.00-08.45
Registration
Welcome speech:
Chair of Organizing Committee
Opening Speech:
09.00-09.10
Rector of IPB
Plenary Session
08.45-09.00
Dr Utut Widyastuti
Dr Sulistijorini
Dr Sri Listyowati
Dr Nisa Rachmania
Dr Kanthi Arum
Puji Rianti, MSi
Dr Achmad Farajallah
Dr Tri Atmowidi
Dr Yohana CS
Dr Aris Tjahjoleksono
09.10-09.30
09.30-10.00
10.00-10.15
Keynote Speaker:
Prof. Dr. lntan Ahmad: Director
General of Learning and Student
Affairs, Ministry of Research,
Technology and Higher Education
Ballroom 1 & 2
Ballroom 1 & 2
Ballroom 1 & 2
Prof. Dr. Supa Hannongbua
Ballroom 1 & 2
Morning tea break
IPB ICC
Invited Speakers:
on Biosciences (!CoSio) 2015
and Natural Sciences
rsity (IPB)
Indonesia
Bogar. 5· 7 August
10.15-10.45
Prof. Dr. Rolf Daniel
10.45-11.15
Dr. Achmad Dinoto
11.15-11.45
Prof. Dr. Daniel Murdiyarso
11.45-12.00
Discussion
Poster Introduction Presentation
(P01-P22)
12.00-12.30
12.30-13.30
Lunch
13.30-14.00
Poster Session
14.00-16.00
Parallel Oral Session
16.00-16.15
Afternoon tea break
16.15-17.15
Parallel Oral Session
18.45-21.00
Welcome Dinner
Ballroom 1 & 2
Ballroom 1 & 2
IPB ICC
Ballroom 1, Ballroom 2,
Meeting Room A,B,C,D
IPB ICC
Ballroom 1, Ballroom 2,
Meeting Room A,B,C,D
Ballroom 1 & 2
International Conference on Biosciences (ICoBio) 2015 · Bogar. 5·7 August 2015
ICoBio.eventipb.ac.id
8
Side event
1. One day Lecture on Bioinformatics
THURSDAY, AUGUST 6, 2015
Time
Activity
allocation
Plenary Session
The lecture is given by Prof. Dr. Rolf Da1
held at Meeting Room of Faculty of Ma1
4, 2015 from 9 am-4 pm. This even\
collaboration with CRC 990 - EFForTS.
Room
Keynote Speaker:
09.00-09.30
Dr. Raymond Tjandrawinata
Ballroom 1 & 2
09.30-09.45
Morning tea break
IPB ICC
Invited Speakers:
09.45-10.15
Prof. Dr. Hiroshi Takagi
10.15-10.45
Dr. Mashuri Waite
Ballroom 1 & 2
10.45-11.15
Dr. Miftahudin
11.15-11.30
Discussion
11.30-12.00
Poster Introduction Presentation
(P23-P42)
Ballroom 1 & 2
12.00-12.30
Poster Session
IPB ICC
12.30-13.30
Lunch
13.30-15.30
Parallel Oral Session
15.30-15.45
Afternoon tea break
15.45-16.45
Parallel Oral Session
16.45-17.00
Closing Ceremony
and see you in !CoBio 2017
IPB ICC
Ballroom 1, Ballroom 2,
Meeting Room A,B,C,D
IPB ICC
Ballroom 1, Ballroom 2,
Meeting Room A,B,C,D
Dean of the Faculty of
Mathematics and Natural
Sciences, IPB
Topics of lecture: (1) Next-generation
analyze and assemble data derivl
Genomeftransciptome analysis and f
metatranscricptomic approaches, (4)
microbial communities
2. Symposium on Bogor Agriculture
Science and Technology (Japan) Grac
The symposium is held at the Researc
Bogor Agricultural University, Gedung
August 2015, from 9 am-3 pm. This ev
collaboration with Research Center
Agricultural University. During the sy
Agricultural University and Nara lnst
research results. The topic of symposiu
on plant, microbe and animal.
Friday, August 7, 2015: Excursion
07.00
08.30-14.00
14.00
Depart to Beautiful Indonesia Miniature Park (Taman Mini
Indonesia Indah, TMJJ), jakarta
TMII: visit the Pavilliun of East java, West Sumatra, Papua, Sulawesi,
Komodo Dragon Park, Lunch, *Friday pray for moslems at
Diponegoro Prince Mosque
Depart to Bogor or to Soekarno Hatta International Airport
International Conference on Biosciences (ICoBio) 2015 · Bogor, 5-7 August 201 5
/CoBio.eventipb.ac. id
International Conference on Biosciences (ICoBio) t
9
8
Side event
1. One day Lecture on Bioinformatics
The lecture is given by Prof. Dr. Rolf Daniel (Georg-August-Universitiit Gottingen) and
held at Meeting Room of Faculty of Mathematics and Natural Sciences IPB on August
4, 2015 from 9 am-4 pm. This event is organized by Department of Biology in
collaboration with CRC 990- EFForTS.
Room
IPB ICC
Topics of lecture: (1) Next-generation sequencing technologies and ways to initiale
analyze and assemble data derived from the different technologies, (2)
Genomeftransciptome analysis and functional annotation, (3) Metagenomic and
metatranscricptomic approaches, (4) Taxonomic and functional assessment of
microbial communities
Ballroom 1 & 2
2. Symposium on Bogor Agricultural University (Indonesia}-Nara Institute of
Science and Technology (Japan} Graduate Student Exchange Program
Ballroom 1 & 2
~ entaio
The symposium is held at the Research Center for Bioresources and Biotechnology,
Bogor Agricultural University, Gedung PAU, Jl. Kamper, Kampus IPB Darmaga on 4
August 2015, from 9 am-3 pm. This event is organized by Department of Biology in
collaboration with Research Center for Bioresources and Biotechnology, Bogor
Agricultural University. During the symposium, the graduate students from Bogor
Agricultural University and Nara Institute of Science and Technology share their
research results. The topic of symposium covers molecular biology and biotechnology
on plant, microbe and animal.
Ballroom 1 & 2
IPB ICC
17
IPB ICC
Ballroom 1, Ballroom 2,
Meeting Room A,B,C,D
IPB ICC
Ballroom 1, Ballroom 2,
Meeting Room A,B,C,D
Dean of the Faculty of
Mathematics and Natural
Sciences, IPB
..
. .
1nes1a Miniature Park (Taman Mini
IJakarta
iof East java, West Sumatra, Papua, Sulawesi,
fnch, *Friday pray for moslems at
i
ekarno Hatta International Airport
i · Bogor, 5·7 August 2015
/CoBio.eventipb.ac.id
International Conference on Biosciences (JCoBio) 2015 • Bogo r, 5·7 August 2015
ICoBio.eventipb.ac.id
55
54
15.18-15.30
DEVELOPMENTAL AND BEHAVIORAL
15.30-15.45
Discussion
AFTERNOON TEA BREAK
MODERATOR: Prof. Dr. Diah Ratnadewi
Lestari
TITLE
Productivity and Specific Growth
Rate of Mixed Microalagae Cultured
in Outdoor
Pond
Physiological Responses of
Transgenic Tobacco (Nicotiana
tabacum L.) Carrying an Aluminum
Tolerance Gene Candidate to
Aluminum Stress
The Role of Phosphorus in
Improving Sorghum Crop (Sorghum
bicolor L. Moench) Tolerance to
Aluminum Stress
Salinity Stress Affects the Decrease
of Cab Gene Expression and
"n~r
International Conference on Bosciences
Program Book
Department of Biology
Table of Contents
Welcome Speech of Chairman of Organizing Committee ............................................................. 1
Opening Remark of Dean of the Faculty of Mathematics and Natural Sciences ................ 3
Opening Remark of Rector of Bogar Agricultural University ..................................................... 4
Committee ........................................................................................................................................................... 6
Conference Program ....................................................................................................................................... 7
IPB ICC Conference Layout.. ...................................................................................................................... lO
Speaker Profiles .............................................................................................................................................. ll
Abstracts of Keynote and Invited Speakers ...................................................................................... 25
Oral and Poster Presentation Schedule ............................................................................................... 37
Abstracts of Oral Presentation ................................................................................................................ 63
Abstracts of Poster Presentation ......................................................................................................... 193
Tour destination: Taman Mini Indonesia Indah and Bogar Botanical Garden ............. 237
Bogar Interesting Places ......................................................................................................................... 238
Common Indonesian Language ............................................................................................................ 239
Index ................................................................................................................................................................. 240
International Conference on Biosciences (ICoBio) 2015- Bogor, 5-7 August 2015
ICoBio.eventipb.ac. id
ii
Welcome Speech of Chair
Our knowledge in
understanding of
application or explo
industrial, medical,
advances in applie
implications, such a
sources, the develo1
of understanding
disorders. Nevertheless, the preseno
molecular biology, bioinformatics, bic
between biological and social bioscienc
better world. Advances in biology wil
individuals and appreciate human biodi
International Conference on Bioscie
"Appreciating Unity in Diversity". Thil
current trends in research and teachin
approaches that are important for unt
Moreover, to encourage the formation
stakeholders to accelerate our efforts I
their applications.
This page intentionally left blank.
The ICoBio 2015 is attended by particiJ
Malaysia, India, Pakistan, Germany, Th<
register are 220 participants. Howevt
accepted as a presenter, so there is s'
(attendant). Due to the wide scope of bit
four main groups focusing on Biodi·
physiological, developmental, and beha
biotechnology, and omic technology (!
biology (group 4).
In addition, a series of activities were <
namely the activity of "One day lecture i
August-Universitat Gi.ittingen, German)
Bogar entitled "Symposium on Bogor
Institute of Science and Technology (J<
Through those activity the participan
regarding bioinformatic and the current
International Conference on Biosciences (ICoBio) 2015 · Bogor, 5-7 August 2015
/CoBio.eventipb.ac.id
International Conference on Biosciences (ICoBio) 20:
1
Welcome Speech of Chairman of Organizing Committee
Our knowledge in biology has allowed us to achieve a better
understanding of many biological phenomena and their
application or exploitation in agriculture, food safety and security,
industrial, medical, and environmental conservation. However,
advances in applied biology ca'l also produce some negative
implications, such as reducing biodiversity, the imbalance in food
sources, the development of new agents of infection, and the lack
of understanding of non-infectious diseases or metabolic
disorders. Nevertheless, the presence of the interdisciplinary sciences such as
molecular biology, bioinformatics, bio-nanotechnology, and even the relationship
between biological and social biosciences, will be a very useful to help us in creating a
better world. Advances in biology will be able to expand our views to be unique
individuals and appreciate human biodiversity to live in peace and harmony.
left blank.
International Conference on Biosciences (ICoBio) 2015 taking the theme of
"Appreciating Unity in Diversity". This conference is intended to gain insight into
current trends in research and teaching related to biology, such as interdisciplinary
approaches that are important for understanding the biology and its applications.
Moreover, to encourage the formation of networks between biologists and relevant
stakeholders to accelerate our efforts to understand the biological phenomena and
their applications.
The ICoBio 2015 is attended by participants from several countries including japan,
Malaysia, India, Pakistan, Germany, Thailand, and Indonesia. Total participants who
register are 220 participants. However not all participant who register can be
accepted as a presenter, so there is some participant suggested as non-presenter
(attendant). Due to the wide scope of bioscience, the ICoBio 2015 topic is divided into
four main groups focusing on Biodiversity, ecology, and evolution (group 1);
physiological, developmental, and behavioral sciences (group 2); Molecular biology,
biotechnology, and omic technology (group 3); and Applied and interdisciplinary
biology (group 4).
In addition, a series of activities were also conducted before the conference begins,
namely the activity of "One day lecture in Bioinformatics by Prof Rolf Daniel - GeorgAugust-Universitat Gi.ittingen, Germany" and mini symposium NAIST japan - IPB
Bogor entitled "Symposium on Bogor Agricultural University (Indonesia) - Nara
Institute of Science and Technology (Japan) Graduate Student Exchange Program".
Through those activity the participants are expected to gain extensive insight
regarding bioinformatic and the current techniques in modern biotechnology.
, 5-7 August ZOlS
International Conference on Biosciences (ICoBio) ZOlS- Bogor, 5-7 August Z015
ICoBio.eventipb.ac.id
2
The ICoBia 2015 is the first international conference organized by the Department of
Biology, Faculty of Mathematics and Natural Sciences, Bogar Agricultural University,
Indonesia and is expected to serve as an initial step to be held continuously every two
years (bianually). This activity is also the first step in the framework of collaboration
between the Faculty of Mathematics and Natural Sciences (especially Department of
Biology) Bogar Agricultural University, Indonesia with the Faculty of Science,
Kasetsart University, Thailand. Through such activities will be able to foster a love of
bioscience and the exchange of information on bioscience and the development of
networking between researchers. I am sure you will be able to find on the conference
program is really fun, encourage intellectual and also provide important insights on
the way forward how to appreciate bioscience.
Special welcome is intended to young scientists and students on whom the future of
biosciences depends. You have a great opportunity at this meeting to get to know the
main leaders in field of bioscience and to network with your colleagues. The need for
international collaboration is essential to take advantage of bioscience and related
sciences optimally.
Finally, I hope you will find your experience in Bogar, Indonesia to be unique,
satisfying, and enjoyable.
With warmest welcome,
Opening Remark of Dean o:
Natur
Bismillahirrahmanirrahim
In the name of Allah the Most Gracious ·
Ladies and gentlemen
First of all I would like to express my
keynote and invited speakers for carr.
Conference on Biosciences (!CoBia ~
Faculty of Mathematics and Natural :
forum is very important to all of us, res
countries, to share and discuss new vie
Your contribution in this seminar will
and research in biosciences, it will alsc
our life and our future. Biosciences con
the Conference "Appreciating Unity in
utilize our diverse knowledge to explo1
and sustainability of humanity.
On this occasion, I especially would li~
Kasetsart University, Thailand for
cooperation with the Faculty of Math en
University, particularly in the area
cooperation will mutually benefit and s
Prof. Aris Tri Wahyudi
Chairman
Organizing Committee
Last but not least, I also would like to I
of Biology, FMIPA-IPB, all of whom
international seminar. I hope this sem
advantages to all participants.
Dr. Jr. Sri Nurdiati, M.Sc
International Conference on Biosciences (ICoBio) 2015- Bogar,· 5-7 August 2015
ICoBio.event. ipb.ac.id
International Conference on Biosciences (ICoBio) 2
2
3
conference organized by the Department of
Sciences, Bogor Agricultural University,
step to be held continuously every two
first step in the framework of collaboration
Natural Sciences (especially Department of
Indonesia with the Faculty of Science,
activities will be able to foster a love of
on bioscience and the development of
you will be able to find on the conference
and also provide important insights on
and students on whom the future of
at this meeting to get to know the
network with your colleagues. The need for
take advantage of bioscience and related
Bogor, Indonesia to be unique,
Opening Remark of Dean of the Faculty of Mathematics and
Natural Sciences
Bismil/ahirrahmanirrahim
In the name of Allah the Most Gracious the Most Merciful
Ladies and gentlemen
First of all I would like to express my sincere gratitude to all participants especially
keynote and invited speakers for coming to this international event, International
Conference on Biosciences (ICoBio 2015) organized by Department of Biology,
Faculty of Mathematics and Natural Sciences, Bogor Agricultural University. This
forum is very important to all of us, researchers from Indonesia as well as from other
countries, to share and discuss new views and information in the field of biosciences.
Your contribution in this seminar will not only support and strengthen our teaching
and research in biosciences, it will also demonstrate how important bioscience is for
our life and our future. Biosciences comprise many disciplines, therefore the theme of
the Conference "Appreciating Unity in Diversity" should be able to encourage us to
utilize our diverse knowledge to explore nature in a spirit of harmony for the benefit
and sustainability of humanity.
On this occasion, I especially would like to thank the Dean of the Faculty of Science,
Kasetsart University, Thailand for her presence which served to strengthen
cooperation with the Faculty of Mathematics and Natural Sciences, Bogor Agricultural
University, particularly in the area of Biological Sciences. We expect that this
cooperation will mutually benefit and strengthen researches in both universities.
Last but not least, I also would like to thank to the entire team from the Department
of Biology, FMIPA-IPB, all of whom worked hard to prepare and organize this
international seminar. I hope this seminar will be successful and will provide many
advantages to all participants.
Dr. Ir. Sri Nurdiati, M.Sc
ICoBio.eventipb.ac.id
International Conference on Biosciences (ICoBio) 2015 • Bogor, 5·7 August 2015
ICoBio.eventipb.ac.id
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Opening Remark of Rector of Bogor Agricultural University
Finally I express my sincere gratitude t<
of !CoBia 2015.
Ladies and Gentlemen,
Thank you for your participation in th1
be enjoyable.
Welcome to Bogar, Indonesia
Welcome to Bogar Agricultural University, Indonesia
Rector of Bogar Agricultural University
It is an honor for us upon your arrival this morning to attend the "International
Conference on Biosciences (!CoBia) 2015" held in Bogar Agricultural University
(Institut Pertanian Bogar, IPB), Indonesia. This conference is an important part in
relation to the basics and applied sciences related to bioscience. In this case, the basic
science is an important part in the development of the applied sciences, especially in
IPB, is also stated in the vision of IPB which will be the front-runner in strengthening
the nation's dignity through excellent higher education on a global level in
agriculture, marine and tropical biosciences. In addition, lPB is also a university that
is heading toward an international research based university, so that this conference
will be an important moment to achieve the IPB vision.
Prof Herry Suhardiyanto
Through this opportunity, we would like to express our gratitude to Director General
of Learning and Student Affairs, Ministry of Research, Technology and Higher
Education, Prof. In tan Ahmad; our collaborators speakers (Prof Hiroshi Takagi - Nara
Institute of Science and Technology, japan; Prof Rolf Daniel - Georg-AugustUniversitat Giittingen, Germany; Prof Supa Hannongbua - Kasetsart University,
Thailand; and Dr. Mashuri Waite- University of Hawaii, USA) and other speakers (Dr.
Reymond Tjandrawinata - PT Dexa Medica jakarta, Indonesia; Prof Daniel Murdiyarso
- Bogar Agricultural University, Indonesia; Dr. Achmad Dinoto - Indonesian Institute
of Sciences, Indonesia; Dr. Miftahudin - Bogar Agricultural University, Indonesia; and
Dr. Seiji Mori- Ibaraki University, japan) for their participation in ICoBio 2015. Also, I
would like to give sincere gratitude to the Organizing Committee and Steering
Committee for the efforts they provide for this international conference.
The main theme of this conference is the "International Conference on Biosciences:
Unity in Diversity". This theme is in accordance with the present condition, where we
can meet each other and exchange information on the development of biosciences in
Indonesia in particular, and also in the world. Through this conference, we also expect
an establishment of network or cooperation between researchers or participants.
ICoBio 2015 is organized by Department of Biology, Faculty of Mathematics and
Natural Sciences, Bogar Agricultural University, as a forum of knowledge sharing in
very wide and global research area in field of bioscience and others related sciences.
This suggests that IPB is active in the development of science and technology, not
only in Indonesia but also in the world.
International Conference on Biosciences (ICoBio) 20
International Conference on Biosciences (ICoBio) 2015- Bogar, 5-7 Augu st 2015
ICoBio.eventipb.ac.id
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Bogor Agricultural University
Finally I express my sincere gratitude to all participants who attended the conference
of !CoBia 2015.
Thank you for your participation in the !CoBia 2015 and I hope this conference will
be enjoyable.
Indonesia
morning to attend the "International
" held in Bogar Agricultural University
This conference is an important part in
to bioscience. In this case, the basic
of the applied sciences, especially in
will be the front-runner in strengthening
higher education on a global level in
In addition, IPB is also a university that
based university, so that this conference
IPB vision.
Rector of Bogar Agricultural University - Indonesia
Prof Herry Suhardiyanto
express our gratitude to Director General
of Research, Technology and Higher
speakers (Prof Hiroshi Takagi - Nara
Prof Rolf Daniel - Georg-AugustHannongbua - Kasetsart University,
of Hawaii, USA) and other speakers (Dr.
Jakarta, Indonesia; Prof Daniel Murdiyarso
Dr. Achmad Dinoto - Indonesian Institute
Agricultural University, Indonesia; and
r their participation in !CoBia 2015. Also, I
the Organizing Committee and Steering
international conference.
"International Conference on Biosciences:
with the present condition, where we
on the development of biosciences in
. Through this conference, we also expect
n between researchers or participants.
of Biology, Faculty of Mathematics and
, as a forum of knowledge sharing in
of bioscience and others related sciences.
of science and technology, not
Bogor, 5-7 August 2015
International Conference on Biosciences (ICoBio) 2015 • Bogor, 5·7 August 20 15
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Committee
Confere1
Steering Committe
WEDNESDAY, AUGUST 5, 2015
Time
Activity
allocation
ProfDr Antonius Suwanto (Chairman)
ProfDr Hiroshi Takagi
Prof Dr Alex Hartana
Prof Dr uharsono
Dr Dedi Duryadi Solihin
Prof Dr Aris Tri Wahyudi
08.00-08.45
Welcome speech:
Chair of Organizing Co
Opening Speech:
09.00-09.10
Rector of IPB
Plenary Session
08.45-09.00
Organizing Committee
ProfDr Aris Tri Wahyudi (Chairman)
Prof Dr YM Diah
Ratnadewi (Secretary)
Dr Rika Raffiudin (Secretary)
Dr Triadiati
Dr Berry }uliandi
Mafrikhul Muttaqin, MSi
Dr Miftahudin
Dr Tatik Chikmawati
Dr Dyah Perwitasari
Prof Dr Anja Meryandini
Registration
Dr Utut Widyastuti
Dr Sulistijorini
Dr Sri Listyowati
Dr Nisa Rachmania
Dr Kanthi Arum
Puji Rianti, MSi
Dr Achmad Farajallah
Dr Tri Atmowidi
DrYohana CS
Dr Aris Tjahjoleksono
Keynote Speaker:
09.10-09.30
Prof. Dr. In tan Ahmad:
General of Learning ar
Affairs, Ministry of Rel
Technology and Highe
09.30-10.00
Prof. Dr. Supa Hannollj
10.00-10.15
Morning tea break
Invited Speakers:
10.15-10.45
The Committee of International Conference on Biosciences (ICoBio) 2015
Department of Biology, Faculty of Mathematics and Natural Sciences
Darmaga Campuss, Bogor Agricultural University (IPB)
}1. Agathis-Kamp':ls IPB Darmaga Bogor 16680 Indonesia
Website: http:/ jicobio.event.ipb.ac.id/
International Conference on Biosciences (ICoBio) 2015- Bogar, 5-7 August 2015
ICoBio.eventipb.ac.id
Prof. Dr. Rolf Daniel
10.45-11.15
Dr. Achmad Dinoto
11.15-11.45
Prof. Dr. Daniel Murdi)
11.45-12.00
Discussion
12.00-12.30
Poster Introduction Pr
(P01-P22)
12.30-13.30
Lunch
13.30-14.00
Poster Session
14.00-16.00
Parallel Oral Session
16.00-16.15
Afternoon tea break
16.15-17.15
Parallel Oral Session
18.45-21.00
Welcome Dinner
International Conference on Biosciences (ICoBio) 20]
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Conference Program
IWEDNESDAY, AUGUST 5, 2015
Time
allocation
Activity
Room
IPB International
08.00-08.45
Registration
Welcome speech:
Chair of Organizing Committee
Opening Speech:
09.00-09.10
Rector of IPB
Plenary Session
08.45-09.00
Dr Utut Widyastuti
Dr Sulistijorini
Dr Sri Listyowati
Dr Nisa Rachmania
Dr Kanthi Arum
Puji Rianti, MSi
Dr Achmad Farajallah
Dr Tri Atmowidi
Dr Yohana CS
Dr Aris Tjahjoleksono
09.10-09.30
09.30-10.00
10.00-10.15
Keynote Speaker:
Prof. Dr. lntan Ahmad: Director
General of Learning and Student
Affairs, Ministry of Research,
Technology and Higher Education
Ballroom 1 & 2
Ballroom 1 & 2
Ballroom 1 & 2
Prof. Dr. Supa Hannongbua
Ballroom 1 & 2
Morning tea break
IPB ICC
Invited Speakers:
on Biosciences (!CoSio) 2015
and Natural Sciences
rsity (IPB)
Indonesia
Bogar. 5· 7 August
10.15-10.45
Prof. Dr. Rolf Daniel
10.45-11.15
Dr. Achmad Dinoto
11.15-11.45
Prof. Dr. Daniel Murdiyarso
11.45-12.00
Discussion
Poster Introduction Presentation
(P01-P22)
12.00-12.30
12.30-13.30
Lunch
13.30-14.00
Poster Session
14.00-16.00
Parallel Oral Session
16.00-16.15
Afternoon tea break
16.15-17.15
Parallel Oral Session
18.45-21.00
Welcome Dinner
Ballroom 1 & 2
Ballroom 1 & 2
IPB ICC
Ballroom 1, Ballroom 2,
Meeting Room A,B,C,D
IPB ICC
Ballroom 1, Ballroom 2,
Meeting Room A,B,C,D
Ballroom 1 & 2
International Conference on Biosciences (ICoBio) 2015 · Bogar. 5·7 August 2015
ICoBio.eventipb.ac.id
8
Side event
1. One day Lecture on Bioinformatics
THURSDAY, AUGUST 6, 2015
Time
Activity
allocation
Plenary Session
The lecture is given by Prof. Dr. Rolf Da1
held at Meeting Room of Faculty of Ma1
4, 2015 from 9 am-4 pm. This even\
collaboration with CRC 990 - EFForTS.
Room
Keynote Speaker:
09.00-09.30
Dr. Raymond Tjandrawinata
Ballroom 1 & 2
09.30-09.45
Morning tea break
IPB ICC
Invited Speakers:
09.45-10.15
Prof. Dr. Hiroshi Takagi
10.15-10.45
Dr. Mashuri Waite
Ballroom 1 & 2
10.45-11.15
Dr. Miftahudin
11.15-11.30
Discussion
11.30-12.00
Poster Introduction Presentation
(P23-P42)
Ballroom 1 & 2
12.00-12.30
Poster Session
IPB ICC
12.30-13.30
Lunch
13.30-15.30
Parallel Oral Session
15.30-15.45
Afternoon tea break
15.45-16.45
Parallel Oral Session
16.45-17.00
Closing Ceremony
and see you in !CoBio 2017
IPB ICC
Ballroom 1, Ballroom 2,
Meeting Room A,B,C,D
IPB ICC
Ballroom 1, Ballroom 2,
Meeting Room A,B,C,D
Dean of the Faculty of
Mathematics and Natural
Sciences, IPB
Topics of lecture: (1) Next-generation
analyze and assemble data derivl
Genomeftransciptome analysis and f
metatranscricptomic approaches, (4)
microbial communities
2. Symposium on Bogor Agriculture
Science and Technology (Japan) Grac
The symposium is held at the Researc
Bogor Agricultural University, Gedung
August 2015, from 9 am-3 pm. This ev
collaboration with Research Center
Agricultural University. During the sy
Agricultural University and Nara lnst
research results. The topic of symposiu
on plant, microbe and animal.
Friday, August 7, 2015: Excursion
07.00
08.30-14.00
14.00
Depart to Beautiful Indonesia Miniature Park (Taman Mini
Indonesia Indah, TMJJ), jakarta
TMII: visit the Pavilliun of East java, West Sumatra, Papua, Sulawesi,
Komodo Dragon Park, Lunch, *Friday pray for moslems at
Diponegoro Prince Mosque
Depart to Bogor or to Soekarno Hatta International Airport
International Conference on Biosciences (ICoBio) 2015 · Bogor, 5-7 August 201 5
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International Conference on Biosciences (ICoBio) t
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8
Side event
1. One day Lecture on Bioinformatics
The lecture is given by Prof. Dr. Rolf Daniel (Georg-August-Universitiit Gottingen) and
held at Meeting Room of Faculty of Mathematics and Natural Sciences IPB on August
4, 2015 from 9 am-4 pm. This event is organized by Department of Biology in
collaboration with CRC 990- EFForTS.
Room
IPB ICC
Topics of lecture: (1) Next-generation sequencing technologies and ways to initiale
analyze and assemble data derived from the different technologies, (2)
Genomeftransciptome analysis and functional annotation, (3) Metagenomic and
metatranscricptomic approaches, (4) Taxonomic and functional assessment of
microbial communities
Ballroom 1 & 2
2. Symposium on Bogor Agricultural University (Indonesia}-Nara Institute of
Science and Technology (Japan} Graduate Student Exchange Program
Ballroom 1 & 2
~ entaio
The symposium is held at the Research Center for Bioresources and Biotechnology,
Bogor Agricultural University, Gedung PAU, Jl. Kamper, Kampus IPB Darmaga on 4
August 2015, from 9 am-3 pm. This event is organized by Department of Biology in
collaboration with Research Center for Bioresources and Biotechnology, Bogor
Agricultural University. During the symposium, the graduate students from Bogor
Agricultural University and Nara Institute of Science and Technology share their
research results. The topic of symposium covers molecular biology and biotechnology
on plant, microbe and animal.
Ballroom 1 & 2
IPB ICC
17
IPB ICC
Ballroom 1, Ballroom 2,
Meeting Room A,B,C,D
IPB ICC
Ballroom 1, Ballroom 2,
Meeting Room A,B,C,D
Dean of the Faculty of
Mathematics and Natural
Sciences, IPB
..
. .
1nes1a Miniature Park (Taman Mini
IJakarta
iof East java, West Sumatra, Papua, Sulawesi,
fnch, *Friday pray for moslems at
i
ekarno Hatta International Airport
i · Bogor, 5·7 August 2015
/CoBio.eventipb.ac.id
International Conference on Biosciences (JCoBio) 2015 • Bogo r, 5·7 August 2015
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15.18-15.30
DEVELOPMENTAL AND BEHAVIORAL
15.30-15.45
Discussion
AFTERNOON TEA BREAK
MODERATOR: Prof. Dr. Diah Ratnadewi
Lestari
TITLE
Productivity and Specific Growth
Rate of Mixed Microalagae Cultured
in Outdoor
Pond
Physiological Responses of
Transgenic Tobacco (Nicotiana
tabacum L.) Carrying an Aluminum
Tolerance Gene Candidate to
Aluminum Stress
The Role of Phosphorus in
Improving Sorghum Crop (Sorghum
bicolor L. Moench) Tolerance to
Aluminum Stress
Salinity Stress Affects the Decrease
of Cab Gene Expression and
"n~r