Materials and methods Directory UMM :Data Elmu:jurnal:A:Aquaculture:Vol185.Issue1-2.May2000:

Ž . ences in the spermatocrit Mair, 1993 , could generate progeny with paternal genetic Ž . Ž material ‘false’ gynogens . This may lead to misinterpretation of the results Carter et . al., 1991 . Furthermore, one should verify the homozygous nature of endomitotic Ž . gynogens Bongers, 1997 and determine the degree of residual heterozygosity, through recombination, in meiogynogenic progeny. It is possible to assess the level of recom- Ž bination and hence the inbreeding rate by using heterozygous females Chourrout, . 1988 . Genetic markers are required to detect paternal contamination and to determine the degree of heterozygosity in gynogenic offspring. Morphological markers can be used if Ž . the trait is based on a recessive allele; such phenotypic markers e.g., albinism were not available in our broodstock. Multilocus DNA fingerprinting has been used for detecting Ž paternal contamination but it is not efficient to verify heterozygosity levels Carter et al., . Ž 1991; Volckaert et al., 1994; Bongers, 1997 . Allozyme markers are useful Linhart et . al., 1987 but they cannot compete with the level of polymorphism and the information Ž . content of single locus microsatellite markers Wright, 1992 . Furthermore, these latter markers allow biopsies. We show the low feasibility of applying heat shocks to induce endomitosis and the presence of a few ‘false’ and relatively many spontaneous gynogens. We provide alternative hypotheses for the high percentage of residual heterozygosity at one of the DNA markers and suggest an alternative estimation of the recombination rate. Finally, we show evidence for male heterogametic sex chromosomes in C. gariepinus.

2. Materials and methods

2.1. Samples The catfish used in this study originate from a stock held at the Laboratory of Aquatic Ecology, Katholieke Universiteit Leuven, Leuven, Belgium, which includes a line Ž . Ž originating from the Hulah Swamps Israel and a line from the Ubangui River Central . African Republic . Fish were kept under standard conditions as detailed in Huisman and Ž . Richter 1987 . Ovulation, egg collection, artificial fertilisation and larviculture have Ž . been described previously Volckaert et al., 1994 . We used in each experiment genetically screened and electronically tagged parents belonging to two different lines. Ž . Ž Adults were sexed externally genital papilla and internally presence of ovaries or . testes . 2.2. Shock experiments The methods for UV-irradiation and heat shocking have been described in Volckaert Ž . Ž . et al. 1994 . We varied the shock-temperature 398C, 408C, 418C and 428C , the Ž . duration of the shock 1, 1.5, 2 and 3 min and especially the time of application after Ž . activation of the egg 1–40 min; at 1 min intervals to determine the optimal shock Ž 2 . Fig. 2. Optimal UV-irradiation dosage Jrcm to inactivate the sperm genetically in function of the Ž 9 . Ž . spermatocrit value number of sperm cells per ml=10 y s 0.367q0.493log x . 10 conditions. The first mitotic division occurred at about 35 m.a.a. at an incubation Ž . temperature of 288C Bongers et al., 1995 . Nevertheless, we applied the shock 1 to 40 m.a.a. to compare yields in survival and heterozygosity in meio- and mitogynogens. For each experimental condition, we obtained the percentage of surviving embryos 24 and Ž 72 h after activation. To allow for comparison between experiments using different . females , standardised survival rates were calculated relative to the positive control Ž . Ž . Ž which is a normal fertilisation Volckaert et al., 1994 . A negative control eggs . activated with irradiated sperm but no shock applied was included to assess the effectiveness of the irradiation. We determined the spermatocrit value of each sperm Ž sample in order to adjust the irradiation time accordingly extended irradiation for . samples with a high spermatocrit value; see Fig. 2 . Not all combinations of shock Ž . temperature and duration were analysed see Results but each experiment was carried Ž . out in duplicate except 398C at 1 min . In total, 17 successful experiments were performed. Embryos were kept at 288C before and after shocking. Putative endomitotic fish were reared to maturity in order to determine their sex. Survival rates were arcsin-transformed and tested for their significance using a one-way ANOVA and Ž . Duncan’s multiple range test Sokal and Rohlf, 1995 . 2.3. Genetic analysis using microsatellite DNA markers Ž . We used five Cga01, Cga02, Cga05, Cga09 and Cga10 out of seven microsatellite Ž . primer sets which have been developed previously Galbusera et al., 1996 and one additional marker, Cga08, similarly developed through the production and screening of a Ž library of short DNA fragments of C. gariepinus. Cga08 GenBank accession number . U30869 has the primer sequences F-CATGAGCCAGACACCATTCCC and R-TTTC- Ž . CATGTGTTGGTCCTTGC, with a GT repeat sequence; PCR products have a size 11 Table 1 Ž . Survival rate percentage relative to the positive control, after 24 and 72 h, rp24 and rp72, respectively of Ž . Ž . positive pos and negative neg control, meiogynogenic and mitogynogenic progeny in each experiment Ž . m.a.a.s minutes after activation — other shock conditions are: temperature in 8C_duration in minutes m.a.a. rp24 rp72 rp24 rp72 rp24 rp72 rp24 rp72 rp24 rp72 39_1 exp1 39_1,5 exp2 39_1,5 exp3 39_2 exp4 39_2 exp5 1 99 2 14 16 2 84 1 14 6 4 5 7 6 3 90 33 7 19 38 25 5 4 83 66 18 28 7 43 7 5 86 73 21 38 2 56 37 5 6 78 1 57 11 37 5 74 27 7 80 51 2 37 71 3 8 87 57 5 38 71 14 9 94 64 3 31 3 54 21 10 91 47 8 46 60 6 63 11 90 63 3 54 59 9 3 12 96 93 13 50 3 51 5 18 13 94 99 8 47 73 58 14 84 81 6 42 7 76 77 15 93 70 5 52 3 59 9 43 16 84 72 40 83 6 39 3 17 90 56 3 61 2 42 44 18 84 87 2 73 100 69 19 88 60 2 68 48 49 5 20 85 1 66 38 41 3 21 86 67 2 30 4 63 65 22 88 47 3 37 36 7 28 5 23 82 63 23 2 10 7 24 76 60 10 8 6 25 52 60 3 26 74 35 2 27 86 6 28 90 37 2 11 15 17 29 88 27 30 87 15 66 3 26 58 31 92 42 32 89 5 26 16 20 33 86 50 4 34 83 20 36 40 44 3 35 88 50 15 5 54 36 71 19 35 3 19 38 37 11 12 20 22 38 23 25 4 24 3 18 5 39 72 9 2 40 73 40 13 5 3 41 64 43 pos 97 97 50 27 92 92 80 67 86 100 pos 103 99 101 98 106 108 123 132 118 98 neg 98 1 60 2 68 4 60 32 neg 93 68 52 4 58 117 Ž . Table 1 continued m.a.a. rp24 rp72 rp24 rp72 rp24 rp72 rp24 rp72 rp24 rp72 40_1 exp6 40_1 exp7 40_1,5 exp8 40_1,5 exp9 41_1 exp10 1 44 7 10 8 5 1 10 9 2 71 13 27 2 5 3 19 4 21 23 3 92 36 56 7 52 5 25 7 35 3 4 101 31 51 6 52 4 36 6 38 2 5 85 41 50 4 69 5 39 4 36 6 93 15 57 4 59 5 30 3 31 7 72 9 38 1 50 3 15 31 8 103 17 47 64 6 12 2 27 9 93 24 26 5 66 3 31 10 89 2 46 3 62 7 1 31 11 86 12 37 9 51 1 7 33 2 12 92 20 55 29 14 2 29 4 13 87 8 36 13 1 7 44 2 14 86 17 38 2 10 9 38 2 15 86 2 3 7 58 16 94 21 12 3 8 1 27 17 64 2 12 7 38 18 87 19 23 1 46 1 6 36 19 85 10 32 2 45 6 10 29 2 20 74 13 24 6 24 4 6 2 31 21 93 20 43 5 6 4 24 22 86 18 34 2 3 8 16 23 81 4 37 8 2 24 91 13 34 5 2 12 1 25 84 11 22 12 6 1 26 71 14 11 33 3 27 44 1 36 3 28 42 11 5 16 1 1 29 38 2 27 1 4 30 65 6 13 3 31 1 7 31 71 3 43 3 11 1 32 95 21 16 33 1 11 1 10 33 81 8 16 12 12 34 109 23 32 2 12 7 1 13 35 96 24 4 21 2 23 1 36 97 21 19 21 2 13 3 37 77 16 16 10 12 17 38 62 16 25 6 27 9 9 39 35 8 19 3 19 12 7 40 26 16 5 15 7 41 22 4 15 42 4 3 pos 104 108 134 145 99 102 104 101 95 85 pos 94 94 64 54 101 97 97 99 107 115 neg 113 31 46 75 2 76 2 42 1 neg 109 30 73 5 89 1 72 15 37 ? ? continued on next page Ž . Table 1 continued m.a.a. rp24 rp72 m.a.a. rp24 rp72 m.a.a. rp24 rp72 m.a.a. rp24 rp72 41_1 exp11 40_1–2 exp12 40_1–2 exp13 41_2 exp14 1 17 2 2 20 28 10 1 51 50 2 42 20 37 2 21 16 5 2 60 26 3 53 3 25 24 22 24 3 50 29 4 68 30 19 23 6 4 37 7 5 83 2 32 34 24 5 13 6 63 34 28 26 10 6 7 73 36 61 27 9 8 3 8 79 7 38 57 1 28 3 10 2 9 60 2 40 42 29 3 4 15 3 10 71 1 42 5 30 17 5 20 14 3 11 64 1 44 4 31 16 24 12 71 2 50 17 32 19 28 13 74 3 55 45 34 57 9 30 1 14 79 60 35 44 32 2 15 61 1 2 39 25 36 24 34 18 16 73 20 12 37 5 7 36 17 71 25 1 38 9 38 18 67 1 30 2 39 40 19 65 1 32 16 40 pos 100 100 20 66 34 13 20 8 neg 80 21 69 36 32 21 11 neg 81 22 66 38 43 22 23 56 40 8 23 24 26 42 1 24 25 1 44 26 26 1 50 6 27 27 2 55 26 28 3 28 7 1 60 29 29 23 pos 122 124 30 30 36 pos 79 75 31 4 5 31 55 neg 77 1 32 32 80 neg 65 34 15 33 78 1 35 7 34 82 1 36 3 35 61 37 36 73 2 38 37 52 2 39 38 25 40 39 36 1 pos 91 78 40 33 pos 105 122 pos 97 93 neg 65 11 pos 103 107 neg 41 4 neg 88 1 neg 42 Ž . range of 158–180 bp and optimal PCR conditions are 628C annealing temperature and 1.5 mM MgCl . Each primer set amplifies a specific microsatellite locus in a PCR. The 2 Ž . Table 1 continued m.a.a. rp24 rp72 m.a.a. rp24 rp72 m.a.a. rp24 rp72 40,5_2 exp15 40_1 exp16 39_1,5 exp17 1 113 98 20 34 27 21 11 2 2 110 82 21 59 39 22 10 5 3 87 1 22 26 15 23 8 2 4 84 23 16 11 24 4 5 114 24 46 30 25 8 6 164 26 23 11 26 2 3 8 168 27 21 8 27 6 2 10 164 28 40 19 28 2 15 40 29 25 5 29 9 20 57 1 30 12 30 13 7 24 1 31 20 15 31 19 2 26 32 15 6 32 13 3 28 3 34 31 26 33 35 30 25 35 25 19 34 39 32 9 36 12 4 35 15 3 34 20 37 39 27 36 16 36 40 38 41 18 37 11 38 14 39 41 25 38 7 2 40 40 17 18 39 10 3 24 pos 100 100 40 2 3 26 neg 104 62 pos 102 121 28 pos 98 75 30 1 neg 46 2 32 neg 31 2 34 36 pos 100 100 neg 169 genomic DNA of fin-clips or whole larvae of about 1 week old was prepared using Ž phenol–chloroform extraction or by boiling for 2 h in a 10 Chelex solution Resin . 100, Bio-Rad Laboratories, Hercules, CA . The DNA was amplified according to Ž . Galbusera et al. 1996 . Three methods are used to visualise these PCR products after electrophoresis depending on the resolution needed to distinguish between alleles. Random labelling 35 Ž with S or end labelling with a fluorescent molecule Fluos-Phosphororamidite from . Eurogentec, Seraing, Belgium is used to visualise the PCR-products which are sepa- rated on a 6 PolyAcrylamide-gel. EtBr is applied after separation of the products on a 4 NuSieve GTG agarose-gel. In order to check whether there is any paternal contamination in the gynogenic progeny caused by incomplete UV-irradiation, broodstock fish were selected with different alleles for at least one microsatellite locus. Heterozygous females were chosen in order to measure recombination rates. Because the strains used have been domesti- Ž . cated for many years about 10 to 20 generations , few females were heterozygous at Ž . several loci Volckaert and Hellemans, 1998 .

3. Results