Cumulative subject index vols. 26–50 BioSystems 53 1999 33–185 153
Diffusion; Mathematical model Mukherjee, D. 31 1993 49–58
Evolution; Simulation; Algorithm; Artificial neural network; Forecasting; Population model English,
T.M. 39 1996 3–18
Exon; Gene structure; Intron; RNA splicing Gelfand, M.S. 30 1993 173–182
Exon; Nucleotide sequence; Protein structure; Amino acid sequence; Data base; Evolution; Gene
duplication; Gene insertion; Hypothesis; Intermethod comparison; Intron Strelets, V.B. 36 1995 37–41
Fungus culture; Growth rate; Biomass; Bioreactor; Cell growth; Cell suspension; Continuous culture;
Culture medium; Feedback system; Metabolism; Monitoring; Optical density; Oscillation; Statistics;
Yeast cell; Alcohol; Glucose Davey, H.M. 39 1996 43–61
Gene control; Metabolism; Gene mutation; Phenotype; Genotype; Regulatory mechanism;
Transcription factor Sharp, D.H. 47 1998 79–90
Molecular biology; Mathematics; Physics; DNA Liberman, E.A. 38 1996 173–177
Protein folding; Simulation; Algorithm; Genetic analysis; Protein conformation; Genetic engineering;
Mutation rate Konig, R. 50 1999 17–25
RNA structure; Theoretical study Kister, A. 30 1993 31–48
Smooth pursuit eye movement; Algorithm; Animal experiment; Eye position; Eye tracking; Hypothesis;
Monkey; Primate; Saccadic eye movement; Signal processing; Visual stimulation; White noise Deno,
D.C. 34 1995 107–128
Speech; Adult; Female; Male; Statistical model Greenwood, G.W. 44 1997 161–165
Pressure
Cell shape; Elasticity; Gene insertion; DNA transcription; RNA translation; DNA supercoiling;
Cell cycle; Force; Stretching; Bacterium; DNA; DNA topoisomerase Norris, V. 49 1999 71–78
Interpersonal communication; Algorithm; Evolution; Game; Language; Population; Simulation Oliphant,
M. 37 1996 31–38 Presynaptic nerve
Nervous system; Nerve conduction; Nerve cell; Spike wave; Statistical model; Synapse Levine, M.W.
48 1998 139–146
Primate
Prediction; Smooth pursuit eye movement; Algorithm; Animal experiment; Eye position; Eye
tracking; Hypothesis; Monkey; Saccadic eye movement; Signal processing; Visual stimulation;
White noise Deno, D.C. 34 1995 107–128
Visual cortex; Latent period; Nerve cell; Signal processing; Temporal cortex; Visual information;
Visual system Richmond, B.J. 40 1997 149–157
Prison
Reinforcement; Algorithm; Computer program; Game; Prisoner Sandholm, T.W. 37 1996 147–166
Prisoner
Reinforcement; Algorithm; Computer program; Game; Prison Sandholm, T.W. 37 1996 147–166
Privacy
Consciousness; Language; Behaviorism; Experience Conrad, D. 46 1998 129–135
Consciousness Conrad, D. 38 1996 207–210 Probability
Animal behavior; Fish; Organization; Population dynamics; Population structure; Animal experiment
Gunji, Y.-P. 50 1999 27–47
Bilayer membrane; Diffusion; Lipid membrane; Association; Dipole; Passive transport; Phospholipid;
Lipid; Protein Movileanu, L. 40 1997 263–275
Cell activity; Computer model; Nerve cell; Accuracy; Density Giorno, V. 40 1997 65–74
Cell activity; Nerve cell; Statistical model; Density Elston, T.C. 40 1997 37–43
Cell membrane potential; Stochastic model; Nerve cell network; Algorithm; Diffusion; Simulation;
154 Cumulative subject index vols. 26–50 BioSystems 53 1999 33–185
Correlation function; Neuroscience Di Nardo, E. 48 1998 29–35
Computer program; Molecular genetics; Data base; Algorithm Krishnamurthy, V. 49 1999 205–228
Computer simulation; Lipid membrane; Lipid monolayer; Amphophile Movileanu, L. 36 1995
43–53
Cooperation; Stochastic model; Competitive behavior; Ecology; Evolution; Game; Interpersonal
communication; Population; Sociology Grim, P. 37 1996 3–17
Ecosystem; Cosmos; Phenomenology; Metaphysics; Information science; Statistics; Thermodynamics
Ulanowicz, R.E. 50 1999 127–142
Hippocampus; Spatial memory; Temporal cortex; Oscillator; Entorhinal cortex; Hippocampus theta
rhythm; Frequency modulation; Experimental model Borisyuk, R.M. 48 1998 3–10
Mathematics; Information science Gray, J.E. 43 1997 55–61
Nerve cell network; Nerve cell; Oscillation; Stochastic model Turova, T. 40 1997 197–202
Nerve cell; Spike; Noise; Electrophysiology; Statistics; Diffusion; Conductance; Hodgkin huxley
equation Rodriguez, R. 48 1998 187–194
Visual cortex; Nerve cell stimulation; Neurotransmission; Computer model; Monkey;
Variance; Spike Wiener, M.C. 48 1998 279–286
Problem solving
Algorithm; Genetics; Evolution; Hypothesis Beyer, H.-G. 41 1997 1–15
Bioengineering; Computer model; Cell; Molecular dynamics; Enzyme Marijuan, P.C. 35 1995
167–170
Bioengineering; Computer program; Compartment model; Computer system; Molecule Conrad, M.
35 1995 161–166
Bioengineering; Computer system; Macromolecule Conrad, M. 35 1995 157–160
Biomedical technology assessment; Computer analysis; Molecular biology; Computer system;
Device; Digital computer; Equipment; Information processing Rambidi, N.G. 44 1997 1–15
Brain; Machine; Device; Information processing Rambidi, N.G. 33 1994 45–54
Computer analysis; Ion channel; Logic; Phosphatase; Phosphotransferase; Protein Tsuda, I. 42 1997
45–64
Computer model; Growth; Reproduction; Adaptation Sosic, R. 36 1995 7–17
Computer simulation; Travel; Adaptive behavior; Algorithm; Intelligence; Reinforcement; Pheromone
Dorigo, M. 43 1997 73–81
Decision making; Digital computer; Information processing; Computer program; Information system
Kampfner, R.R. 35 1995 229–232
Productivity
Biological model; Ant; Computer simulation; Computer network; Technique; Computer memory;
Associative memory Nugala, V. 45 1998 87–97
Information system; Adaptation; Society; Work De Vree, J.K. 38 1996 221–227
Population dynamics; Ecosystem; Estuary; Growth rate; India; Invertebrate; Predator; Steady state
Sarkar, A.K. 44 1997 153–160
Progeny
Adaptation; Genotype; Sorghum; Sodium chloride Seligmann, H. 40 1997 257–261
Algorithm; Evolution; Genetics; Intermethod comparison Saravanan, N. 36 1995 157–166
Immune response; Immunity; Antigen presenting cell; B lymphocyte; Dendritic cell; Immune system;
Immunological memory; Maternal antibody; Antigen Anderson, R.W. 34 1995 87–105
Prokaryote
Genetic code; Amino acid analysis; DNA helix; Eukaryote; Nucleotide sequence; Statistical analysis;
Protein; Alanine; Amino acid; Asparagine; DNA; Glutamine; Glycine; Leucine; Lysine; Trinucleotide;
Tyrosine; Valine Arques, D.G. 44 1997 107–134
Cumulative subject index vols. 26–50 BioSystems 53 1999 33–185 155
Promoter region
Binding site; Computer analysis; Breast; Consensus sequence; Female; Gene; Gene sequence; Hormonal
regulation; Nucleotide sequence; Rabbit; β-Casein; Transcription factor; DNA binding protein; Milk
protein Malewski, T. 36 1995 109–119
Computer analysis; Gene expression; Binding site; Milk protein; Transcription factor Malewski, T.
45 1998 29–44
Gene control; Transcription initiation; Transcription regulation; Bacterium; Linguistics Collado-Vides, J.
29 1993 87–104
Protein DNA binding; Transcription initiation; Transcription regulation; Bacterium; Binding site;
Linguistics Collado-Vides, J. 29 1993 105–128
Proprioception
Feedback system; Sensory system; Visual system; Artificial neural network; Mathematical analysis
Salomon, R. 47 1998 193–206
Protamine
Membrane filter; Oscillation; Stimulation; Alamethicin; Bacteriorhodopsin; Lipid; Proton pump
Ikematsu, M. 35 1995 123–128
Protein
Amino acid sequence; DNA sequence; RNA sequence; Base mispairing; Stochastic model; DNA;
RNA Zharkikh, A.A. 30 1993 93–111
Bilayer membrane; Diffusion; Lipid membrane; Association; Dipole; Passive transport; Probability;
Phospholipid; Lipid Movileanu, L. 40 1997 263–275
Bioengineering; Light absorption; Photochemistry; Electronics; Film; Purple membrane; Signal noise
ratio; Bacteriorhodopsin Chen, Z. 35 1995 145–151
Computer analysis; Ion channel; Logic; Problem solving; Phosphatase; Phosphotransferase Tsuda, I.
42 1997 45–64
Conformational transition; Allosterism; Cell communication; System analysis; Polymerization;
Nucleic acid Maekawa, K. 46 1998 217–233
Genetic code; Amino acid analysis; DNA helix; Eukaryote; Nucleotide sequence; Prokaryote;
Statistical analysis; Alanine; Amino acid; Asparagine; DNA; Glutamine; Glycine; Leucine;
Lysine; Trinucleotide; Tyrosine; Valine Arques, D.G. 44 1997 107–134
Information science; Entropy; Music; DNA; Virus DNA Ebeling, W. 46 1998 47–55
Inheritance; Cell structure; Ecology; Genome; Literature; Metabolism; Phenotype; DNA Paton, R.
40 1997 245–255
Metabolism; Metabolite; Catalysis; Computer simulation; Enzyme substrate; Mathematical
analysis; Metabolic regulation; Titrimetry; Adenosine diphosphate; Adenosine phosphate; Adenosine
triphosphate; Enzyme; Nicotinamide adenine dinucleotide; Reduced nicotinamide adenine
dinucleotide Sauro, H.M. 33 1994 55–67
Molecular dynamics; Enzyme mechanism; Protein interaction; Thermodynamics; Water Watterson, J.G.
41 1997 141–152
Molecular recognition; Surface charge; Evolution; Mutant protein Soda, K. 43 1997 199–204
Protein conformation
Amino acid sequence; Chemical structure; Crystal structure; Nuclear magnetic resonance; X-ray
crystallography; Alanine; Oligopeptide; Polypeptide antibiotic agent Bhatnagar, S. 34 1995 143–148
Codon; Genetic code Siemion, I.Z. 32 1994 25–35
Frequency analysis; Computer model; Molecular recognition; Protein protein interaction; Amino acid;
T lymphocyte receptor; Immunoglobulin Lara-Ochoa, F. 39 1996 77–86
Immunoglobulin structure; Molecular recognition; Immunoglobulin variable region Lara-Ochoa, F.
32 1994 1–9
Protein folding; Simulation; Algorithm; Genetic analysis; Prediction; Genetic engineering; Mutation
rate Konig, R. 50 1999 17–25
156 Cumulative subject index vols. 26–50 BioSystems 53 1999 33–185
Protein degradation
Enzyme activity; Information processing; Protein synthesis; Enzyme Marijuan, P.C. 38 1996
163–171
Protein DNA binding
Transcription initiation; Transcription regulation; Bacterium; Binding site; Linguistics; Promoter region
Collado-Vides, J. 29 1993 105–128
Protein family
Spirochete; Heat shock protein; Tubulin; Antibody Munson, D. 31 1993 161–167
Protein folding
Cell communication; Information science; Language; Linguistics; Molecular biology; Bioenergy;
Creativity; Cybernetics; Developmental biology; Eukaryotic cell; Gene expression; Gene function;
Gene location; Gene mapping; Genetic code; Molecular evolution; Molecular model; Nucleotide
sequence; Phonetics; Physical parameters; Semantics; Signal processing; Sound; Structural gene; Vision;
Amino acid; Cell DNA Ji, S. 44 1997 17–39
Simulation; Algorithm; Genetic analysis; Protein conformation; Prediction; Genetic engineering;
Mutation rate Konig, R. 50 1999 17–25
Protein interaction
Molecular dynamics; Enzyme mechanism; Thermodynamics; Protein; Water Watterson, J.G.
41 1997 141–152
Protein isolation
Animal cell; Erythroleukemia cell; Extraction; Mouse; Oscillation; Insulin Ferreira, G.M.N.
32 1994 183–190
Protein kinase
Nerve cell network; Nerve cell plasticity; Synaptic transmission; Hippocampus; Neocortex; Interneuron;
Computer model; Calcium cell level; Neurotransmitter; Calcium ion; Phosphatase Silkis,
I.G. 48 1998 205–213
Signal transduction; Cell function; Information processing; Second messenger; Protein
phosphorylation; Thermodynamics; Cell communication; Cell protein; Enzyme; Adenylate
cyclase; Receptor; Cyclic AMP; Phosphatase; 6-Phosphofructokinase; Glycogen phosphorylase;
Phosphoprotein phosphatase 1; Cell surface receptor; Phosphodiesterase; Adrenalin; Phosphoprotein;
Protein tyrosine kinase; Calcineurin; Protein tyrosine phosphatase; S6 kinase; Phosphoprotein phosphatase
inhibitor; Fatty acid; Mitogen activated protein kinase; Glucagon; Phospholipase; Phosphoprotein
phosphatase Fisher, M.J. 50 1999 159–171
Protein phosphorylation
Cell cycle; Mitosis; Calcium; Cycline; Inositol trisphosphate; Protein tyrosine kinase; Ubiquitin
Baran, I. 33 1994 203–214
Erythroleukemia cell; Animal cell; Autoradiography; Cell structure; Controlled study; Densitometry;
Mouse; Oscillation; Periodicity; Polyacrylamide gel electrophoresis; Stimulation; Insulin Ferreira,
G.M.N. 33 1994 31–43
Signal transduction; Cell function; Information processing; Second messenger; Thermodynamics;
Cell communication; Cell protein; Enzyme; Adenylate cyclase; Receptor; Cyclic AMP; Protein
kinase; Phosphatase; 6-Phosphofructokinase; Glycogen phosphorylase; Phosphoprotein
phosphatase 1; Cell surface receptor; Phosphodiesterase; Adrenalin; Phosphoprotein;
Protein tyrosine kinase; Calcineurin; Protein tyrosine phosphatase; S6 kinase; Phosphoprotein phosphatase
inhibitor; Fatty acid; Mitogen activated protein kinase; Glucagon; Phospholipase; Phosphoprotein
phosphatase Fisher, M.J. 50 1999 159–171
Protein protein interaction
Frequency analysis; Computer model; Molecular recognition; Protein conformation; Amino acid;
T lymphocyte receptor; Immunoglobulin Lara-Ochoa, F. 39 1996 77–86
Cumulative subject index vols. 26–50 BioSystems 53 1999 33–185 157
Protein stability
Electric activity; Protein structure; Surface charge; Acetylation; Aqueous solution; Coulometry; Electric
model; Electricity; Fish; Ion current; Mathematical analysis; Methodology; pH; Physical chemistry;
Anion; Cytochrome C; Globular protein; Lysine Miki, Y. 44 1997 69–77
Protein structure
Electric activity; Protein stability; Surface charge; Acetylation; Aqueous solution; Coulometry; Electric
model; Electricity; Fish; Ion current; Mathematical analysis; Methodology; pH; Physical chemistry;
Anion; Cytochrome C; Globular protein; Lysine Miki, Y. 44 1997 69–77
Exon; Nucleotide sequence; Amino acid sequence; Data base; Evolution; Gene duplication; Gene
insertion; Hypothesis; Intermethod comparison; Intron; Prediction Strelets, V.B. 36 1995 37–41
Immunoglobulin variable region; Amino acid sequence; Computer program; Frequency analysis;
Immunoglobulin receptor Almagro, J.C. 35 1995 25–32
Metabolism; Genetics; Enzyme activity; Metabolic regulation; Gene sequence; Data base; Mathematical
analysis; Kinetics; Metabolic disorder; Gene control; Editorial Hofestadt, R. 47 1998 IX-X
Metabolism; Mathematical model; Chemical structure; Enzyme mechanism; Membrane transport;
Nucleic acid structure; Metabolic regulation; Standardization; Information processing Michal, G.
47 1998 1–7
Poliomyelitis virus; Algorithm; Biopolymer; Virus protein Leontovich, A.M. 30 1993 57–63
Protein subunit
Exon; Algorithm; Coding; Ribosome; Ribosome RNA Mendoza, L. 38 1996 45–49
Protein synthesis
Amino acid sequence; Comparative study; Enzyme specificity; Evolution; Fossil; Hypothesis; Coenzyme
A; Polypeptide antibiotic agent Di Giulio, M. 39 1996 159–169
Biogenesis; Adsorption; Chirality; Clay; Dust; Evolution; Biopolymer; Nucleoprotein Nussinov,
M.D. 42 1997 111–118
Enzyme activity; Information processing; Protein degradation; Enzyme Marijuan, P.C. 38 1996
163–171
Evolution; Species differentiation; Symbiosis Margulis, L. 31 1993 121–125
Protein tyrosine kinase
Cell adhesion; Extracellular matrix; Cell cycle; Computer simulation; Signal transduction;
Carcinoembryonic antigen; Cell adhesion molecule; Growth factor; Integrin Kraus, M. 33 1994 89–98
Cell cycle; Mitosis; Protein phosphorylation; Calcium; Cycline; Inositol trisphosphate; Ubiquitin
Baran, I. 33 1994 203–214
Signal transduction; Cell function; Information processing; Second messenger; Protein
phosphorylation; Thermodynamics; Cell communication; Cell protein; Enzyme; Adenylate
cyclase; Receptor; Cyclic AMP; Protein kinase; Phosphatase; 6-Phosphofructokinase; Glycogen
phosphorylase; Phosphoprotein phosphatase 1; Cell surface receptor; Phosphodiesterase; Adrenalin;
Phosphoprotein; Calcineurin; Protein tyrosine phosphatase; S6 kinase; Phosphoprotein phosphatase
inhibitor; Fatty acid; Mitogen activated protein kinase; Glucagon; Phospholipase; Phosphoprotein
phosphatase Fisher, M.J. 50 1999 159–171
Protein tyrosine phosphatase
Signal transduction; Cell function; Information processing; Second messenger; Protein
phosphorylation; Thermodynamics; Cell communication; Cell protein; Enzyme; Adenylate
cyclase; Receptor; Cyclic AMP; Protein kinase; Phosphatase; 6-Phosphofructokinase; Glycogen
phosphorylase; Phosphoprotein phosphatase 1; Cell surface receptor; Phosphodiesterase; Adrenalin;
Phosphoprotein; Protein tyrosine kinase; Calcineurin; S6 kinase; Phosphoprotein phosphatase inhibitor;
158 Cumulative subject index vols. 26–50 BioSystems 53 1999 33–185
Fatty acid; Mitogen activated protein kinase; Glucagon; Phospholipase; Phosphoprotein
phosphatase Fisher, M.J. 50 1999 159–171
Proteinase Amino acid sequence; Zinc Kister, A. 30 1993
233–240
Proteinoid
Molecular stability; Energy; Microsphere; Unclassified drug Muller-Herold, U. 33 1994
215–220
Protist
Energy metabolism; Eukaryote; Evolution; Parasite Muller, M. 28 1992 33–40
Eukaryote; Nomenclature; Taxonomy Corliss, J.O. 28 1992 1–14
Proton pump
Bioengineering; Electronics; Halobacterium halobium; Measurement; Photoreceptor;
Photosynthesis; Purple membrane; Bacteriorhodopsin; Rhodopsin Hong, F.T. 35 1995
117–121
Membrane filter; Oscillation; Stimulation; Alamethicin; Bacteriorhodopsin; Protamine; Lipid
Ikematsu, M. 35 1995 123–128
Respiratory chain; Metabolic regulation; Enzyme kinetics; Thermodynamics; Enzyme mechanism;
Stoichiometry; Bioenergy; Mathematical parameters; Adenosine triphosphatase potassium sodium
Schuster, S. 49 1999 1–15
Proton transport
Computer model; Electron transport; Conformation; Ion channel; Macromolecule Christophorov, L.N.
35 1995 171–174 Proton transporting adenosine triphosphate
synthase Molecular recognition; Escherichia coli; Flagellum;
Methodology; Virtual reality; Bacterial membrane; Computer model Lahoz-Beltra, R. 44 1997
209–229
Protozoon
Cell cycle; Computer simulation; Microbial growth; System analysis; Algorithm; Ciliate; Growth rate;
Life cycle; Partition coefficient; Population model Hatziz, C. 36 1995 19–35
Ciliary motility; Cytoskeleton; Electron transport; Intracellular transport; Microtubule; Computer
simulation; Electrophysiology; Euglena gracilis; Photoreceptor; Vertebrate; Adenosine triphosphatase
Insinna, E.M. 39 1996 187–226
Kinetoplast; Trypanosoma; Enzyme subunit; Evolution; Mitochondrion; RNA editing; RNA
processing; Cytochrome C oxidase Landweber, L.F. 28 1992 41–45
Nucleolus; RNA transcription; Genetic code; In situ hybridization; Ribosome RNA Geraud, M.-L.
26 1991 61–74
Psychobiology
Brain function; Molecular biology; Behavior; Memory Rossi, E.L. 38 1996 199–206
Consciousness; Cognition; Liquid; Heart rhythm; Brain; Sensation; Perception; Experience;
Psychodynamics; Social life; Hormone Rossi, E.L. 46 1998 113–122
Psychodynamics
Consciousness; Cognition; Liquid; Heart rhythm; Brain; Sensation; Perception; Experience;
Psychobiology; Social life; Hormone Rossi, E.L. 46 1998 113–122
Public health
Human immunodeficiency virus infection; Infection prevention; Mathematical model; Virus transmission;
Cumulative subject index vols. 26–50 BioSystems 53 1999 33–185 159
Acquired immune deficiency syndrome; Chemoprophylaxis; Community; Human
immunodeficiency virus 1; Survival time; Antivirus agent; Didanosine; Zidovudine Hsieh, Y.-H.
35 1995 75–81
Pulsatile hormone release
Hypothalamus hypophysis thyroid system; Mathematical model; Hormone binding Li, G.
35 1995 83–92
Pulse rate
Pacemaker; Heart muscle fiber membrane potential; Mathematical model; Oscillation; Sinus node; Spike
wave Sato, S. 40 1997 169–176
Pulse wave
Avoidance behavior; Electric fish; Experimental model; Electric activity; Organ; Simulation Capurro,
A. 48 1998 21–27
