Resurrected process and quasi-stationary distribution The resurrected Wright-Fisher diffusion

Corollary 2.12. Let x ∈ [0, 1]. We have, for all λ ≥ 0, E [1 + λ Z |X = x] = x1 − x ∞ X a= 2 € x a− 1 + 1 − x a− 1 Š +∞ X a= 1 a− 1 Y k= 1 kk + 1 + 2λ kk + 1 , 24 with the convention Q ; = 1. We have PZ = 0|X = x = 2x1 − x, and, for all k ∈ N ∗ , P Z = k|X = x = 2 k− 1 3 x 1 − x X 1a k ···a 1 ∞ a 1 + 1a 1 + 2 € x a 1 −2 + 1 − x a 1 −2 Š k Y i= 1 1 a i − 1a i + 2 · 25 We also have E [Z|X = x] = 2 1 + x logx + 1 − x log1 − x . 26 The second moment of Z conditionally on Y resp. X can be deduced from 21 resp. 24 or from 4 and 14 resp. 16. Some elementary computations give: P Z = 0|X = x = 2x1 − x, P Z = 1|X = x = 1 3 ” x 2 + 1 − x 2 − 2x1 − x lnx1 − x — , P Z = 2|X = x = 2 3 11 6 x 2 + 1 − x 2 − 1 − x ln1 − x − x lnx + 2 3 x 1 − x – 2 − π 2 3 + 2 lnx ln1 − x − 1 3 lnx1 − x ™ . We recover by integration of the previous equations the following results from [26]: P Z = 0 = 1 3 , P Z = 1 = 11 27 and P Z = 2 = 107 243 − 2 81 π 2 . 3 Stationary distribution of the relative size for the two oldest families

3.1 Resurrected process and quasi-stationary distribution

Let E be a subset of R. We recall that if U = U t , t ≥ 0 is an E-valued diffusion with absorbing states ∆, we say that a distribution ν is a quasi-stationary distribution QSD of U if for any Borel set A ⊂ R, P ν U t ∈ A|U t 6∈ ∆ = νA t ≥ 0, where we write P ν when the distribution of U is ν. See also [31] for QSD for diffusions with killing. Let µ and ν be two distributions on E\∆. We define U µ the resurrected process associated to U, with resurrection distribution µ, under P ν as follows: 1. U is distributed according to ν and U µ t = U t for t ∈ [0, τ 1 , where τ 1 = inf{s ≥ 0; U s ∈ ∆}. 789 2. Conditionally on τ 1 , {τ 1 ∞}, U µ t , t ∈ [0, τ 1 , U µ t+τ 1 , t ≥ 0 is distributed as U µ under P µ . According to Lemma 2.1 of [4], the distribution µ is a QSD of U if and only if µ is a stationary distribution of U µ . See also the pioneer work of [13] in a discrete setting. The uniqueness of quasi-stationary distributions is an open question in general. We will give a ge- nealogical representation of the QSD for the Wright-Fisher diffusion and the Wright-Fisher diffusion conditioned not to hit 0, as well as for the Moran model for the discrete case. We also recall that the so-called Yaglom limit µ is defined by lim t→∞ P x U t ∈ A|U t 6∈ ∆ = µA ∀A ∈ BR, provided the limit exists and is independent of x ∈ E\∆.

3.2 The resurrected Wright-Fisher diffusion

From Corollary 2.3 and comments below it, we get that the relative proportion of one of the two oldest families at a time when a new MRCA is established is distributed according to the uniform distribution over [0, 1]. Then the relative proportion evolves according to a Wright-Fisher WF diffusion. In particular it hits the absorbing state of the WF diffusion, {0, 1}, in finite time. At this time one of the two oldest families dies out and there a new MRCA is again established. The QSD distribution of the WF diffusion exists and is the uniform distribution, see [12, p. 161], or [18] for an explicit computation. From Section 3.1, we get that in stationary regime, for fixed t and of course at time when a new MRCA is established the relative size, X t , of one of the two oldest families taken at random is uniform over 0, 1. Similar arguments as those developed in the proof of Proposition 3.1 yield that the uniform distri- bution is the only QSD of the WF diffusion. Lemma 2.1 in [4] implies there is no other resurrection distribution which is also the stationary distribution of the resurrected process.

3.3 The oldest family with the immortal line of descent

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