Morfologi, Budidaya dan Manfaat Kacang Bogor

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2.7 Gen Pto

Gen yang mengendalikan sifat ketahanan terdiri atas dua kelompok yaitu: kelompok gen yang terlibat dalam pengenalan patogen atau sinyal transduksi disebut gen ketahanan R gene; kelompok lainnya yang terlibat dalam mekanisme ketahanan dan sintesis produk yang dibutuhkan untuk pengenalan patogen Chinchilla et al. 2006. Berdasarkan domain structural yang dimiliki, gen ketahanan R gene dapat dikelompokkan menjadi tiga kelompok: 1 gen yang menyandi protein yang mengandung Nucleotide Binding Site dan Leucine-Rich Repeat NBS-LRR; 2 gen yang menyandi protein yang mengandung SerinThreonin Kinase STK; 3 gen yang menyandi protein yang mengandung extracitoplasmic Leucine-Rich Repeat eLRR Gao et al. 2005. Berbagai gen ketahanan telah berhasil diisolasi dari beberapa tanaman seperti kacang tanah Yuksel et al. 2005, kapas Gao et al. 2005, sorghum Totad et al. 2005, pisang Miller et al. 2008, tomat Pedley dan Martin 2003, gandum Zhang et al. 2011 dan apel Baek dan Choi 2013. Gen pto adalah sebuah protein kinase yang hanya mengandung Ser-Thr Kinase tanpa LRR Kim et al. 2002 dan Rpg1 yang mengkode receptor kinase- like protein dengan 2 protein kinase Brueggeman et al. 2002. Kedua gen ini merupakan kelompok R gene yang berinteraksi secara langsung dengan masing- masing penyebab serangan penyakit Wu et al. 2004. Gen Pto membutuhkan protein NBARC-LRR Prf untuk berfungsi Salmeron et al. 1996. Daftar Pustaka Amadou HI, Bebeli PJ, Kaltsikes PJ. 2001. Genetic diversity in Bambara groundnut Vigna subterranea L. germplasm revealed by RAPD markers. Genome. 446:995-999. Baek DE, Choi C. 2013. Identification of resistance gene analogs in Korean wild apple germplasm collections. Genet Mol Res. 121:483-493. Baker CM, Durham RE, Burns JA, Parrott WA, Wetzstein HY. 1995. High frequency somatic embryogenesis in peanut Arachis hypogaea L. using mature, dry seed. Plant Cell Reports. 151:38-42. Basu S, Roberts JA, Azam-Ali SN, Mayes S. 2007. Bambara groundnut. Di dalam: Kole C, editor. Genome Mapping and Molecular Breeding in Plants. Volume 3: Pulses, Sugar and Tuber Crops. Pennsylvania State University US: Springer Verlag Berlin Heidelberg. hlm 159-173. Brough SH, Taylo, AJ, Azam-Ali SN. 1993. The potential of bambara groundnut Vigna subterranea in vegetable milk production and basic protein functionality systems. Food Chem. 473:277-283. Brueggeman R, Rostoks N, Kudrna D, Kilian A, Han F, Chen J, Druka A, Steffenson B, Kleinhofs A. 2002. The barley stem rust-resistance gene Rpg1 is a novel disease-resistance gene with homology to receptor kinases. Proc Natl Acad Sci. 9914:9328-9333. Cattan-Toupance I, Michalakis Y, Neema C. 1998. Genetic structure of wild bean populations in their South-Andean centre of origin. Theoretical and applied genetics. 966:844-851. 17 Chengalrayan K, Hazra S, Gallo-Meagher M. 2001. Histological analysis of somatic embryogenesis and organogenesis induced from mature zygotic embryo-derived leaflets of peanut Arachis hypogaea L.. Plant Science. 1613:415-421. Chinchilla D, Bauer Z, Regenass M, Boller T, Felix G. 2006. The Arabidopsis receptor kinase FLS2 binds flg22 and determines the specificity of flagellin perception. Plant Cell. 182:465-476. Droste A, Silva AM, Souza IF, Wiebke-Strohm B, Bucker-Neto L, Bencke M, Sauner MV, Bodanes-Zanettini MH. 2010. Screening of Brazilian soybean genotypes with high potential for somatic embryogenesis and plant regeneration. Pesquisa Agropecuária Brasileira. 457:715-720. Edy A, Pujisiswanto H. 2008. Pengaruh 2,4-D terhadap induksi embrio somatik eksplan leaflet pada beberapa varietas kacang tanah Arachis hipogeae L. secara in vitro. Seminar Nasional Sains dan Teknologi-II. 2008, November 17-18: Univ Lampung ID. hal 41-50. Gao Y, Guo W, Wang L, Zhang T. 2006. 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W.J.Microbiol Biotechnol. 142:177-184. Gupta PK, Roy JK, Prasad M. 2001. Single nucleotide polymorphisms: A new paradigm for molecular marker technology and DNA polymorphism detection with emphasis on their use in plants. Current Sci. 804:524-535. Hampson K, Azam-Ali SH, Sesay A, Mukwaya SM, Azam-Ali SN. 2000. Assessing opportunities for increased utilisation of bambara groundnut in southern africa. Loughborough UK: University of Nottingham. 67 hlm. Joshi M, Sujatha K, Harza S. 2008. Effect of TDZ and 2,4-D on peaut somatic embryogenesis and in vitro bud development. Plant Cell Tiss Organ Cult. 941:85-90. Kalia RK, Rai MK, Kalia S, Singh R, Dhawan AK. 2011. Microsatellite markers: an overview of the recent progress in plants. Euphytica. 1773:309-334. Kim Y, Lin N, Martin G. 2002. Two distinct Pseudomonas effector proteins interact with the Pto kinase and activate plant immunity. Cell. 1095:589- 598. 18 Konate S, Kone M, Kouakou HT, Kouadio JY, Zouzou M. 2013. Callus induction and proliferation from cotyledon explants in bambara groundnut. African Crop Science Journal. 213:255-263. Kuswanto, Waluyo B, Pramantasari RA, Candra S. 2012. Koleksi dan Evaluasi Galur-Galur Lokal Kacang Bogor Vigna subterranea. Seminar Nasional Perhimpunan Ilmu Pemuliaan Indonesia PERIPI [internet] 2012 November 6; Bogor ID. academia.edu. hlm 1-12; [diunduh 2014 Februari 03]. Tersedia pada: http:www.academia.edu2147504Koleksi_dan_ Evaluasi_Galur-galur_Lokal_Kacang_Bogor_Vigna_ subterranea.pdf. Lacroix B, Assoumou Y, Sangwan RS. 2003. Efficient in vitro direct shoot organogenesis of fertile plants from embryo explants of Bambara groundnut Vigna subterranea L. Verdc.. Plant Cell Report. 2112:1153-1158. Linnemann AR, Azam-Ali SN. 1993. Bambara groundnut. Di dalam: Williams JT, editor. Pulses and Vegetables. London GB: Chapman and Hall. hlm 13-58. Loganathan M, Maruthasalam S, Ling YS, Wei CL, Wen HH, Pei FL, Chih WY, Chin HL. 2010. Regeneration of soybean Glycine max L. Merrill through direct somatic embryogenesis from the immature embryonic shoot tip. in Vitro Cell Dev Biol Plant. 463:265 –273. Miller RNG, Bertioli DJ, Baurens FC, Santos CMR, Alves PC, Martins NF, Togawa RC, Souza-Júnior MT, Pappas-Júnior GJ. 2008. Analysis of non- TIR-NBS-LRR resistance gene analogs in Musa acuminate Colla: isolation, RFLP marker development, and physical mapping. BMC Plant Biology. 81:15. Mohan M, Nair S, Bhagwat A, Krishna TG, Yano M. 1997. Genome mapping, molecular markers and marker-assisted selection in crop plants. Molecular Breeding. 32:87-103. Mondini L, Noorani A, Pagnotta MA. 2009. Assessing plant genetic diversity by molecular tools. Diversity. 11:19-35. Mongomake K, Hilaire KT, Daouda K, Michel Z, Justin KY, Ochatt SJ. 2009. In vitro plantlets regeneration in Bambara groundnut Vigna subterranea L. Verdc. through direct shoot bud differentiation on hypocotyl and epicotyl cuttings. African Journal of Biotechnology. 88:1466-1473. Ntundu WH, Bach IC, Christiansen JL, Andersen SB. 2004. Analysis of genetic diversity in bambara groundnut Vigna subterrnea L. Verdc. landraces using amplified fragment length polymorphism AFLP markers. African Journal of Biotechnology. 34:220-225. Olukolu BA, Mayes S, Stadler F, Ng NQ, Fawole I, Dominique D, Azam-Ali SN, Abbott AG, Kole C. 2012. Genetic diversity in Bambara groundnut Vigna subterranea L. Verdc. as revealed by phenotypic descriPTOrs and DArT marker analysis. Genetic Resources and Crop Evolution. 593:347-358. Pasquet RS, Schwedes S, Gepts P. 1999. Isozyme diversity in Bambara groundnut. Crop Science. 394:1228-1236. Pedley KF, Martin GB. 2003. Molecular basis of Pto-mediated resistance to bacterial speck disease in tomato. Annu Rev Phytopathol. 411:215-243. Pierik LLM. 1987. In vitro Culture of Hinger Plant. Netherlands NL: Martinus- Nijhoff Publ, Dordrecht. 344 hlm.